C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007AX_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000006468-ENSDARG00000038012 CGP 7955 3:29596592-29635010
GeneTranscriptPositionBiotype
ENSDARG00000006468 (grap2a)
GRB2-related adaptor protein 2a 		ENSDART00000020381 (grap2a-001) 29596592-29619978 protein_coding
ENSDART00000134258 (grap2a-002) 29609636-29619150 protein_coding
ENSDARG00000038012 (FAM83F (2 of 2))
family with sequence similarity 83, member F 		ENSDART00000103592 (FAM83F (2 of 2)-001) 29620402-29635010 protein_coding
CIL_0007AX_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000074837-ENSDARG00000023624 CGP 7955 6:559307-586930
GeneTranscriptPositionBiotype
ENSDARG00000023624 (fam83fb)
family with sequence similarity 83, member Fb 		ENSDART00000055409 (fam83fb-001) 575542-586930 protein_coding
ENSDARG00000074837 (grap2b)
GRB2-related adaptor protein 2b 		ENSDART00000110189 (grap2b-001) 559307-574266 protein_coding
ENSDART00000151003 (grap2b-002) 559353-571798 retained_intron
ENSDART00000151446 (grap2b-003) 559354-572015 retained_intron
ENSDART00000151580 (grap2b-005) 559420-572786 protein_coding
ENSDART00000151665 (grap2b-004) 571874-572780 retained_intron
CIL_0007AX_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000100351-ENSG00000133477 CGP 9606 22:39901082-40043529
GeneTranscriptPositionBiotype
ENSG00000100351 (GRAP2)
GRB2-related adaptor protein 2 		ENST00000344138 (GRAP2-001) 39901082-39973721 protein_coding
ENST00000407075 (GRAP2-003) 39946817-39971105 protein_coding
ENST00000420971 (GRAP2-004) 39926591-39960175 protein_coding
ENST00000460449 (GRAP2-006) 39969375-39971187 retained_intron
ENST00000461082 (GRAP2-002) 39926649-39948481 retained_intron
ENST00000478445 (GRAP2-005) 39926603-39966109 processed_transcript
ENST00000481263 (GRAP2-007) 39966050-39968696 retained_intron
ENSG00000133477 (FAM83F)
family with sequence similarity 83, member F 		ENST00000333407 (FAM83F-002) 39994949-40043529 protein_coding
ENST00000473717 (FAM83F-001) 40009688-40030031 protein_coding
ENST00000488874 (FAM83F-003) 39995362-39999125 processed_transcript
ENSG00000225528 (RP3-370M22.8)
 ENST00000424496 (RP3-370M22.8-001) 39960397-39964683 sense_intronic
ENSG00000261202 (RP3-496C20.1)
 ENST00000569912 (RP3-496C20.1-001) 40043068-40044530 antisense
CIL_0007AX_0004 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000042351-ENSMUSG00000022408 CGP 10090 15:80623505-80700420
GeneTranscriptPositionBiotype
ENSMUSG00000022408 (Fam83f)
family with sequence similarity 83, member F 		ENSMUST00000023044 (Fam83f-201) 80671847-80700420 protein_coding
ENSMUSG00000042351 (Grap2)
GRB2-related adaptor protein 2 		ENSMUST00000043149 (Grap2-201) 80623505-80650559 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007AX_0001ENSDARG00000006468ENSDART00000020381ENSDART00000134258ENSDARG00000038012ENSDART00000103592CIL_0007AX_0002ENSDARG00000023624ENSDART00000055409ENSDARG00000074837ENSDART00000110189ENSDART00000151003ENSDART00000151446ENSDART00000151580ENSDART00000151665CIL_0007AX_0003ENSG00000100351ENST00000344138ENST00000407075ENST00000420971ENST00000460449ENST00000461082ENST00000478445ENST00000481263ENSG00000133477ENST00000333407ENST00000473717ENST00000488874ENSG00000225528ENST00000424496ENSG00000261202ENST00000569912CIL_0007AX_0004ENSMUSG00000022408ENSMUST00000023044ENSMUSG00000042351ENSMUST00000043149
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007AX_0001ENSDARG00000006468ENSDART00000020381ENSDARG00000038012ENSDART00000103592CIL_0007AX_0002ENSDARG00000023624ENSDART00000055409ENSDARG00000074837ENSDART00000110189ENSDART00000151446ENSDART00000151580ENSDART00000151665CIL_0007AX_0003ENSG00000100351ENST00000344138ENST00000407075ENST00000460449ENSG00000133477ENST00000333407ENST00000473717ENSG00000225528ENST00000424496ENSG00000261202ENST00000569912CIL_0007AX_0004ENSMUSG00000022408ENSMUST00000023044ENSMUSG00000042351ENSMUST00000043149
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000006468 ENSDART00000020381 N/A N/A N/A 1.733±1.03 N/A N/A 3.290±0.23 18.181±9.17 0.201±0.00 N/A 1.947±0.00 N/A N/A N/A
ENSDART00000134258 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000038012 ENSDART00000103592 N/A N/A N/A 0.091±0.01 N/A N/A 0.038±0.01 0.860±0.38 0.042±0.00 N/A 0.095±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000023624 ENSDART00000055409 N/A N/A N/A 0.040±0.01 N/A N/A 0.167±0.10 0.594±0.17 N/A N/A 0.265±0.00 N/A N/A N/A
ENSDARG00000074837 ENSDART00000110189 N/A N/A N/A 0.480±0.32 N/A N/A 4.183±2.30 9.670±3.03 0.097±0.00 N/A 3.820±0.00 N/A N/A N/A
ENSDART00000151003 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000151446 N/A N/A N/A 0.462±0.20 N/A N/A 3.002±0.00 10.286±0.00 N/A N/A N/A N/A N/A N/A
ENSDART00000151580 N/A N/A N/A 1.345±0.00 N/A N/A 3.576±0.32 N/A 0.114±0.00 N/A N/A N/A N/A N/A
ENSDART00000151665 N/A N/A N/A N/A N/A N/A N/A N/A 0.291±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000100351 ENST00000344138 0.179±0.00 2.455±0.00 N/A N/A 0.213±0.00 0.260±0.00 0.085±0.02 N/A 0.284±0.00 0.802±0.36 0.023±0.00 0.293±0.12 0.319±0.07 1.115±0.12
ENST00000407075 N/A N/A N/A N/A N/A N/A 0.109±0.00 0.222±0.00 N/A 1.444±0.00 N/A 0.489±0.00 0.272±0.02 1.846±0.00
ENST00000420971 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000460449 N/A N/A N/A N/A N/A N/A N/A N/A 0.555±0.26 N/A N/A N/A 0.920±0.42 N/A
ENST00000461082 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478445 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000481263 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000133477 ENST00000333407 0.246±0.00 0.181±0.00 0.676±0.00 0.046±0.02 0.748±0.20 0.546±0.36 0.214±0.17 0.660±0.54 0.095±0.02 0.103±0.00 0.032±0.00 0.697±0.38 0.010±0.00 0.735±0.10
ENST00000473717 0.407±0.00 N/A N/A N/A N/A 0.822±0.00 N/A N/A 0.660±0.00 0.309±0.00 N/A 7.568±6.28 0.159±0.03 20.348±9.06
ENST00000488874 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000225528 ENST00000424496 0.010±0.00 0.250±0.00 N/A 0.031±0.00 0.112±0.08 0.312±0.22 0.023±0.00 0.010±0.00 0.056±0.00 0.568±0.29 N/A 0.054±0.03 0.039±0.00 0.074±0.01
ENSG00000261202 ENST00000569912 N/A N/A N/A 0.087±0.00 N/A N/A N/A N/A 0.334±0.00 N/A N/A N/A N/A 5.216±2.02
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022408 ENSMUST00000023044 0.674±0.15 0.042±0.02 9.236±0.64 0.137±0.03 2.455±1.10 12.569±1.16 0.069±0.03 1.339±0.16 0.795±0.57 0.741±0.28 0.080±0.06 1.112±0.36 3.892±1.68 0.433±0.24
ENSMUSG00000042351 ENSMUST00000043149 0.308±0.14 0.271±0.16 0.180±0.00 0.052±0.02 6.547±0.35 0.638±0.15 0.180±0.08 0.247±0.13 1.767±2.13 1.665±0.46 0.121±0.19 0.284±0.15 0.749±0.44 0.369±0.12

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