C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier family 25 (mitochondrial carrier; peroxisomal membrane protein, 34kDa), member 17
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000100372 SLC25A17 9606 - 22:40769630-40819399 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000263255 SLC25A17-003 40769630-40819330 nonsense_mediated_decay
  ENST00000402844 SLC25A17-004 40770088-40780194 protein_coding
  ENST00000412879 SLC25A17-008 40777338-40819389 nonsense_mediated_decay
  ENST00000420970 SLC25A17-016 40770895-40819326 nonsense_mediated_decay
  ENST00000426396 SLC25A17-014 40777360-40819332 nonsense_mediated_decay
  ENST00000427084 SLC25A17-011 40777060-40819367 nonsense_mediated_decay
  ENST00000430221 SLC25A17-009 40773937-40819316 nonsense_mediated_decay
  ENST00000434185 SLC25A17-010 40792532-40819375 protein_coding
  ENST00000434193 SLC25A17-007 40779034-40819337 nonsense_mediated_decay
  ENST00000435456 SLC25A17-001 40769630-40819382 protein_coding
  ENST00000443810 SLC25A17-006 40777299-40819380 nonsense_mediated_decay
  ENST00000447566 SLC25A17-012 40770489-40819350 nonsense_mediated_decay
  ENST00000449676 SLC25A17-013 40779078-40819346 nonsense_mediated_decay
  ENST00000458600 SLC25A17-005 40777228-40819399 nonsense_mediated_decay
  ENST00000478550 SLC25A17-015 40779062-40780255 processed_transcript
  ENST00000491545 SLC25A17-002 40769630-40819338 processed_transcript
  ENST00000544408 SLC25A17-201 40769630-40819399 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000263255ENST00000402844ENST00000412879ENST00000426396ENST00000427084ENST00000430221ENST00000435456ENST00000443810ENST00000447566ENST00000478550ENST00000491545ENST00000544408
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000263255 1.265±0.00 N/A 0.347±0.00 0.836±0.00 N/A 0.873±0.00 0.269±0.00 N/A N/A 2.199±0.00 0.566±0.00 N/A N/A N/A
ENST00000402844 N/A N/A 0.301±0.00 N/A 0.437±0.08 0.424±0.00 0.216±0.00 N/A N/A N/A N/A 1.033±0.13 N/A N/A
ENST00000412879 N/A N/A N/A N/A 1.468±0.00 1.885±0.00 0.958±0.00 1.687±0.00 N/A N/A N/A N/A N/A N/A
ENST00000426396 N/A N/A 0.864±0.00 1.614±0.00 1.043±0.00 N/A N/A N/A N/A N/A N/A 4.005±0.00 N/A N/A
ENST00000427084 N/A N/A N/A N/A N/A 0.453±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000430221 N/A N/A N/A 1.571±0.00 N/A N/A N/A N/A 2.685±0.00 N/A N/A 2.406±0.00 N/A N/A
ENST00000435456 0.646±0.00 N/A N/A N/A 0.460±0.08 0.504±0.00 0.336±0.00 1.456±0.24 1.035±0.80 0.447±0.00 N/A 10.273±4.64 4.526±2.70 3.650±0.00
ENST00000443810 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.787±0.00 N/A N/A N/A N/A
ENST00000447566 3.273±0.00 6.129±0.00 N/A 3.844±0.00 4.287±0.00 2.828±0.00 0.859±0.00 8.640±0.00 3.863±0.00 1.402±0.00 N/A 6.846±4.81 5.541±0.35 6.051±1.23
ENST00000478550 N/A N/A 4.057±0.00 N/A N/A N/A N/A N/A N/A 3.616±0.00 N/A N/A N/A N/A
ENST00000491545 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.364±0.00 N/A 0.432±0.00 N/A N/A
ENST00000544408 N/A 1.878±0.00 N/A 1.774±0.00 1.043±0.00 0.669±0.00 N/A N/A 0.902±0.00 N/A N/A 4.677±0.00 1.507±0.00 3.070±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005WB CIL_0005WB_0001 CGP 22:40678750-40819399
CIL_0005WC CIL_0005WC_0001 CGP 22:40769630-40857022

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001561 TAS fatty acid alpha-oxidation
GO:0005215 IEA transporter activity
GO:0005347 IGI ATP transmembrane transporter activity
GO:0005515 IPI protein binding
GO:0005739 IEA mitochondrion
GO:0005743 IEA mitochondrial inner membrane
GO:0005777 IDA peroxisome
GO:0005778 IDA peroxisomal membrane
GO:0005779 IDA integral component of peroxisomal membrane
GO:0006635 IGI fatty acid beta-oxidation
GO:0006810 IEA transport
GO:0015217 IDA ADP transmembrane transporter activity
GO:0015228 IDA coenzyme A transmembrane transporter activity
GO:0015230 IDA FAD transmembrane transporter activity
GO:0015866 IDA ADP transport
GO:0015867 IGI ATP transport
GO:0015908 IGI fatty acid transport
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane
GO:0035349 IDA coenzyme A transmembrane transport
GO:0035350 IDA FAD transmembrane transport
GO:0043132 IDA NAD transport
GO:0043231 IDA intracellular membrane-bounded organelle
GO:0044255 TAS cellular lipid metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0044610 IDA FMN transmembrane transporter activity
GO:0051087 IPI chaperone binding
GO:0051724 IDA NAD transporter activity
GO:0055085 IEA transmembrane transport
GO:0080121 IDA AMP transport
GO:0080122 IDA AMP transmembrane transporter activity
GO:1901679 IDA nucleotide transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000061684 slc25a17 solute carrier family 25 (mitochondrial carrier, peroxisomal membrane protein), member 17 protein_coding Danio_rerio
ENSMUSG00000022404 Slc25a17 solute carrier family 25 (mitochondrial carrier, peroxisomal membrane protein), member 17 protein_coding Mus_musculus

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