C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005WB_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000128285-ENSG00000100372 CGP 9606 22:40678750-40819399
GeneTranscriptPositionBiotype
ENSG00000100372 (SLC25A17)
solute carrier family 25 (mitochondrial carrier; peroxisomal membrane protein, 34kDa), member 17 		ENST00000263255 (SLC25A17-003) 40769630-40819330 nonsense_mediated_decay
ENST00000402844 (SLC25A17-004) 40770088-40780194 protein_coding
ENST00000412879 (SLC25A17-008) 40777338-40819389 nonsense_mediated_decay
ENST00000420970 (SLC25A17-016) 40770895-40819326 nonsense_mediated_decay
ENST00000426396 (SLC25A17-014) 40777360-40819332 nonsense_mediated_decay
ENST00000427084 (SLC25A17-011) 40777060-40819367 nonsense_mediated_decay
ENST00000430221 (SLC25A17-009) 40773937-40819316 nonsense_mediated_decay
ENST00000434185 (SLC25A17-010) 40792532-40819375 protein_coding
ENST00000434193 (SLC25A17-007) 40779034-40819337 nonsense_mediated_decay
ENST00000435456 (SLC25A17-001) 40769630-40819382 protein_coding
ENST00000443810 (SLC25A17-006) 40777299-40819380 nonsense_mediated_decay
ENST00000447566 (SLC25A17-012) 40770489-40819350 nonsense_mediated_decay
ENST00000449676 (SLC25A17-013) 40779078-40819346 nonsense_mediated_decay
ENST00000458600 (SLC25A17-005) 40777228-40819399 nonsense_mediated_decay
ENST00000478550 (SLC25A17-015) 40779062-40780255 processed_transcript
ENST00000491545 (SLC25A17-002) 40769630-40819338 processed_transcript
ENST00000544408 (SLC25A17-201) 40769630-40819399 protein_coding
ENSG00000128285 (MCHR1)
melanin-concentrating hormone receptor 1 		ENST00000249016 (MCHR1-001) 40678750-40682814 protein_coding
ENST00000381433 (MCHR1-003) 40679273-40682083 protein_coding
ENST00000465662 (MCHR1-004) 40680107-40681412 processed_transcript
ENST00000498400 (MCHR1-002) 40679273-40682083 processed_transcript
ENSG00000230769 (RP3-408N23.4)
 ENST00000424746 (RP3-408N23.4-001) 40788777-40789267 processed_pseudogene
ENSG00000233603 (JTBP1)
jumping translocation breakpoint pseudogene 1 		ENST00000441314 (JTBP1-001) 40798039-40798285 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

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CIL_0005WB_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000050164-ENSMUSG00000022404 CGP 10090 15:81235499-81360765
GeneTranscriptPositionBiotype
ENSMUSG00000022404 (Slc25a17)
solute carrier family 25 (mitochondrial carrier, peroxisomal membrane protein), member 17 		ENSMUST00000023040 (Slc25a17-201) 81318921-81360765 protein_coding
ENSMUSG00000050164 (Mchr1)
melanin-concentrating hormone receptor 1 		ENSMUST00000166855 (Mchr1-201) 81235499-81238963 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005WB_0001ENSG00000100372ENST00000263255ENST00000402844ENST00000412879ENST00000420970ENST00000426396ENST00000427084ENST00000430221ENST00000434185ENST00000434193ENST00000435456ENST00000443810ENST00000447566ENST00000449676ENST00000458600ENST00000478550ENST00000491545ENST00000544408ENSG00000128285ENST00000249016ENST00000381433ENST00000465662ENST00000498400ENSG00000230769ENST00000424746ENSG00000233603ENST00000441314CIL_0005WB_0002ENSMUSG00000022404ENSMUST00000023040ENSMUSG00000050164ENSMUST00000166855
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005WB_0001ENSG00000100372ENST00000263255ENST00000402844ENST00000412879ENST00000426396ENST00000427084ENST00000430221ENST00000435456ENST00000443810ENST00000447566ENST00000478550ENST00000491545ENST00000544408ENSG00000128285ENST00000249016ENST00000381433ENST00000465662ENST00000498400ENSG00000230769ENST00000424746ENSG00000233603ENST00000441314CIL_0005WB_0002ENSMUSG00000022404ENSMUST00000023040ENSMUSG00000050164ENSMUST00000166855
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000100372 ENST00000263255 1.265±0.00 N/A 0.347±0.00 0.836±0.00 N/A 0.873±0.00 0.269±0.00 N/A N/A 2.199±0.00 0.566±0.00 N/A N/A N/A
ENST00000402844 N/A N/A 0.301±0.00 N/A 0.437±0.08 0.424±0.00 0.216±0.00 N/A N/A N/A N/A 1.033±0.13 N/A N/A
ENST00000412879 N/A N/A N/A N/A 1.468±0.00 1.885±0.00 0.958±0.00 1.687±0.00 N/A N/A N/A N/A N/A N/A
ENST00000420970 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000426396 N/A N/A 0.864±0.00 1.614±0.00 1.043±0.00 N/A N/A N/A N/A N/A N/A 4.005±0.00 N/A N/A
ENST00000427084 N/A N/A N/A N/A N/A 0.453±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000430221 N/A N/A N/A 1.571±0.00 N/A N/A N/A N/A 2.685±0.00 N/A N/A 2.406±0.00 N/A N/A
ENST00000434185 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000434193 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000435456 0.646±0.00 N/A N/A N/A 0.460±0.08 0.504±0.00 0.336±0.00 1.456±0.24 1.035±0.80 0.447±0.00 N/A 10.273±4.64 4.526±2.70 3.650±0.00
ENST00000443810 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.787±0.00 N/A N/A N/A N/A
ENST00000447566 3.273±0.00 6.129±0.00 N/A 3.844±0.00 4.287±0.00 2.828±0.00 0.859±0.00 8.640±0.00 3.863±0.00 1.402±0.00 N/A 6.846±4.81 5.541±0.35 6.051±1.23
ENST00000449676 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000458600 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478550 N/A N/A 4.057±0.00 N/A N/A N/A N/A N/A N/A 3.616±0.00 N/A N/A N/A N/A
ENST00000491545 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.364±0.00 N/A 0.432±0.00 N/A N/A
ENST00000544408 N/A 1.878±0.00 N/A 1.774±0.00 1.043±0.00 0.669±0.00 N/A N/A 0.902±0.00 N/A N/A 4.677±0.00 1.507±0.00 3.070±0.00
ENSG00000128285 ENST00000249016 0.027±0.00 N/A N/A 0.640±0.00 N/A N/A 0.039±0.00 N/A 0.330±0.00 0.060±0.00 N/A 0.524±0.47 0.046±0.02 0.106±0.00
ENST00000381433 0.047±0.00 0.310±0.00 N/A 0.920±0.00 N/A 0.246±0.00 N/A 0.364±0.00 N/A N/A N/A 3.042±0.00 0.156±0.02 N/A
ENST00000465662 N/A N/A N/A N/A 0.090±0.00 N/A N/A N/A N/A 0.423±0.00 N/A 0.357±0.12 0.136±0.00 N/A
ENST00000498400 N/A N/A N/A N/A N/A N/A N/A 0.131±0.00 N/A N/A N/A 0.557±0.00 0.091±0.00 N/A
ENSG00000230769 ENST00000424746 N/A 0.570±0.00 N/A 0.189±0.00 0.794±0.48 N/A 0.182±0.00 0.898±0.00 N/A N/A N/A 0.301±0.08 N/A 0.100±0.00
ENSG00000233603 ENST00000441314 0.209±0.00 0.072±0.00 N/A 0.077±0.00 N/A N/A N/A 0.433±0.00 N/A N/A N/A 0.378±0.00 N/A 0.159±0.03
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022404 ENSMUST00000023040 30.992±3.07 18.962±2.50 33.457±7.92 23.428±13.53 20.291±4.21 16.880±1.69 6.968±0.74 46.671±4.40 24.387±2.91 24.639±3.02 4.580±0.47 21.401±3.82 21.602±12.46 5.164±1.93
ENSMUSG00000050164 ENSMUST00000166855 0.207±0.14 0.378±0.19 4.050±0.07 1.900±1.15 0.298±0.12 1.082±0.21 0.038±0.00 0.954±0.17 1.399±2.10 0.710±0.19 1.668±0.64 0.780±0.47 0.306±0.28 0.221±0.16

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