C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: adaptor-related protein complex 4, sigma 1 subunit
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000100478 AP4S1 9606 + 14:31025106-31096450 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000216366 AP4S1-001 31025651-31086450 protein_coding
  ENST00000313566 AP4S1-201 31025470-31083609 protein_coding
  ENST00000334725 AP4S1-003 31025668-31085211 protein_coding
  ENST00000542754 AP4S1-002 31025466-31096450 protein_coding
  ENST00000554345 AP4S1-005 31025683-31085789 protein_coding
  ENST00000554609 AP4S1-004 31025671-31093432 protein_coding
  ENST00000555417 AP4S1-008 31026643-31066219 protein_coding
  ENST00000556232 AP4S1-007 31025647-31072973 protein_coding
  ENST00000556480 AP4S1-009 31066296-31073185 protein_coding
  ENST00000557346 AP4S1-006 31025106-31092999 protein_coding
  ENST00000616371 AP4S1-202 31026643-31096449 protein_coding
  ENST00000622409 AP4S1-203 31025106-31096449 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000313566ENST00000542754ENST00000554609ENST00000556232ENST00000556480ENST00000557346ENST00000616371ENST00000622409
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000313566 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.628±0.00 N/A N/A N/A
ENST00000542754 1.103±0.00 3.124±0.00 1.801±1.22 1.457±0.00 1.582±0.00 0.742±0.68 1.841±0.00 0.625±0.00 1.189±0.00 0.703±0.00 1.954±1.16 1.067±0.21 0.903±0.00
ENST00000554609 N/A N/A 3.743±0.16 N/A 1.841±0.00 1.739±0.00 N/A N/A 1.349±0.00 N/A 2.039±0.50 1.555±0.67 5.414±1.43
ENST00000556232 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.133±0.00 6.459±0.00
ENST00000556480 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.652±0.00 4.286±0.00 16.803±0.00
ENST00000557346 N/A N/A N/A N/A N/A 0.572±0.00 N/A N/A N/A 2.222±0.00 N/A N/A N/A
ENST00000616371 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.333±0.00 N/A 1.124±0.16
ENST00000622409 N/A N/A 1.086±0.00 0.892±0.00 N/A N/A N/A 0.752±0.00 0.404±0.00 0.375±0.00 0.648±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004EI CIL_0004EI_0001 CGP 14:30874514-31026401
CIL_0003SU CIL_0003SU_0001 CGP 14:30893799-31096450
CIL_0004EG CIL_0004EG_0001 CGP 14:31025106-31207804

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005215 TAS transporter activity
GO:0005794 IEA Golgi apparatus
GO:0005905 IEA coated pit
GO:0006810 IEA transport
GO:0008565 IEA protein transporter activity
GO:0015031 IEA protein transport
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000054220 ap4s1 adaptor-related protein complex 4, sigma 1 subunit protein_coding Danio_rerio
ENSMUSG00000020955 Ap4s1 adaptor-related protein complex AP-4, sigma 1 protein_coding Mus_musculus

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