C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: casein kinase 2, alpha 1 polypeptide
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000101266 CSNK2A1 9606 - 20:473591-543821 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000217244 CSNK2A1-002 481097-543821 protein_coding
  ENST00000349736 CSNK2A1-001 481097-543821 protein_coding
  ENST00000400217 CSNK2A1-003 483701-543787 protein_coding
  ENST00000400227 CSNK2A1-009 478456-543696 protein_coding
  ENST00000460062 CSNK2A1-007 495740-543729 protein_coding
  ENST00000608066 CSNK2A1-005 499909-543729 protein_coding
  ENST00000608490 CSNK2A1-004 504784-508562 retained_intron
  ENST00000609525 CSNK2A1-006 499924-541075 protein_coding
  ENST00000609606 CSNK2A1-008 499726-543729 retained_intron
  ENST00000619188 CSNK2A1-201 482696-543729 protein_coding
  ENST00000619801 CSNK2A1-010 473591-488736 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000217244ENST00000349736ENST00000400217ENST00000619188
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000217244 N/A N/A 0.664±0.00 N/A 2.413±0.00 3.347±0.00 N/A N/A N/A N/A 0.920±0.00 4.165±0.00 N/A 4.619±2.18
ENST00000349736 2.871±0.00 9.599±0.00 1.800±0.00 8.639±3.97 3.586±0.05 3.497±0.36 6.822±3.51 5.419±4.83 4.069±0.00 3.611±1.56 12.299±9.71 8.648±4.07 8.897±0.77 N/A
ENST00000400217 N/A N/A N/A 5.581±0.00 N/A 4.808±0.00 2.838±0.00 1.646±0.00 4.206±0.00 N/A N/A 12.831±6.72 6.471±0.00 25.975±0.00
ENST00000619188 2.936±0.00 N/A 4.996±0.00 5.559±0.00 4.331±0.00 N/A 3.698±1.02 2.997±1.34 3.778±2.07 3.909±1.42 6.147±3.86 7.490±0.87 8.575±2.30 7.890±1.72

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00096R CIL_00096R_0001 VISTA 20:23407-624368

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000278 TAS mitotic cell cycle
GO:0004672 IEA protein kinase activity
GO:0004674 IDA protein serine/threonine kinase activity
GO:0004713 IEA protein tyrosine kinase activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005634 IDA nucleus
GO:0005829 TAS cytosol
GO:0005886 TAS plasma membrane
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006468 IDA:IEA protein phosphorylation
GO:0007165 TAS signal transduction
GO:0007411 TAS axon guidance
GO:0008284 IDA positive regulation of cell proliferation
GO:0016055 IEA Wnt signaling pathway
GO:0016580 IDA Sin3 complex
GO:0016581 IDA NuRD complex
GO:0016772 IEA transferase activity, transferring phosphorus-containing groups
GO:0030177 IMP positive regulation of Wnt signaling pathway
GO:0030307 IDA positive regulation of cell growth
GO:0031519 IDA PcG protein complex
GO:0043154 IMP negative regulation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0045732 IDA positive regulation of protein catabolic process
GO:0047485 IPI protein N-terminus binding
GO:0048511 IEA rhythmic process
GO:0051879 TAS Hsp90 protein binding
GO:0061077 TAS chaperone-mediated protein folding
GO:0071174 IMP mitotic spindle checkpoint

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000091702 CU928126.3 Uncharacterized protein protein_coding Danio_rerio
ENSMUSG00000074698 Csnk2a1 casein kinase 2, alpha 1 polypeptide protein_coding Mus_musculus
ENSMUSG00000101523 CSNK2A1 casein kinase 2, alpha 1 polypeptide protein_coding Mus_musculus

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