C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier family 52 (riboflavin transporter), member 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000101276 SLC52A3 9606 - 20:760080-768487 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000217254 SLC52A3-001 760080-768487 protein_coding
  ENST00000381944 SLC52A3-004 760080-768487 protein_coding
  ENST00000473664 SLC52A3-002 761024-765825 processed_transcript
  ENST00000488495 SLC52A3-003 765950-768482 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000217254ENST00000381944ENST00000473664ENST00000488495
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000217254 1.060±0.00 0.981±0.00 2.270±0.00 0.451±0.30 0.311±0.00 0.510±0.43 3.702±0.00 0.163±0.00 0.186±0.13 0.656±0.00 1.188±0.64 1.384±0.30 11.284±5.73
ENST00000381944 0.169±0.00 N/A 0.326±0.00 0.389±0.00 0.486±0.00 0.608±0.00 1.824±0.00 N/A 0.251±0.00 N/A 0.841±0.38 1.068±0.10 N/A
ENST00000473664 N/A N/A N/A N/A N/A N/A N/A N/A 0.387±0.00 N/A N/A N/A N/A
ENST00000488495 0.685±0.00 N/A 1.496±0.00 N/A 0.351±0.00 N/A N/A 0.165±0.00 0.443±0.00 N/A N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005886 TAS plasma membrane
GO:0005887 IDA integral component of plasma membrane
GO:0006766 TAS vitamin metabolic process
GO:0006767 TAS water-soluble vitamin metabolic process
GO:0006771 TAS riboflavin metabolic process
GO:0007605 IMP sensory perception of sound
GO:0032217 IDA riboflavin transporter activity
GO:0032218 IDA riboflavin transport
GO:0034605 IEA cellular response to heat
GO:0044281 TAS small molecule metabolic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000042737 slc52a3 solute carrier family 52, riboflavin transporter, member 3 protein_coding Danio_rerio
ENSMUSG00000027463 Slc52a3 solute carrier protein family 52, member 3 protein_coding Mus_musculus

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