C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier protein family 52, member 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000027463 Slc52a3 10090 + 2:151996511-152009258 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000073228 Slc52a3-001 151996535-152009258 protein_coding
  ENSMUST00000109858 Slc52a3-003 151999897-152009246 protein_coding
  ENSMUST00000109859 Slc52a3-201 151996511-152009257 protein_coding
  ENSMUST00000109861 Slc52a3-002 151999865-152009222 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000073228ENSMUST00000109858ENSMUST00000109859ENSMUST00000109861
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000073228 2.956±1.11 1.809±0.68 5.545±0.79 0.274±0.10 3.136±0.73 24.350±3.15 0.584±0.20 3.410±0.63 0.318±0.25 8.043±2.44 0.312±0.11 2.899±1.30 10.190±11.63 N/A
ENSMUST00000109858 N/A N/A N/A N/A 0.749±0.21 N/A 0.221±0.00 N/A 0.028±0.00 N/A 0.105±0.00 1.441±0.69 4.623±2.82 0.877±0.00
ENSMUST00000109859 0.770±0.25 0.428±0.00 N/A N/A 1.018±0.00 4.845±0.00 0.164±0.00 1.046±0.00 0.157±0.08 2.120±0.30 0.279±0.10 N/A 1.047±0.00 N/A
ENSMUST00000109861 2.269±1.03 N/A 10.667±0.28 0.133±0.05 1.208±0.71 3.339±0.00 0.316±0.09 3.869±0.94 0.063±0.03 6.791±1.81 0.186±0.00 4.542±1.84 1.864±0.22 15.037±7.72

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000PI CIL_0000PI_0002 CGP 2:151996511-152095802

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005887 ISS integral component of plasma membrane
GO:0007605 ISS sensory perception of sound
GO:0032217 ISS riboflavin transporter activity
GO:0032218 ISS riboflavin transport
GO:0034605 IDA cellular response to heat

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000042737 slc52a3 solute carrier family 52, riboflavin transporter, member 3 protein_coding Danio_rerio
ENSG00000101276 SLC52A3 solute carrier family 52 (riboflavin transporter), member 3 protein_coding Homo_sapiens

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