C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: myomesin 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000101605 MYOM1 9606 - 18:3066807-3220108 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000261606 MYOM1-003 3066953-3219849 protein_coding
  ENST00000356443 MYOM1-001 3066807-3220108 protein_coding
  ENST00000400569 MYOM1-201 3066808-3193954 protein_coding
  ENST00000577294 MYOM1-002 3135058-3142019 retained_intron
  ENST00000581075 MYOM1-004 3075738-3090766 nonsense_mediated_decay
  ENST00000581804 MYOM1-006 3067265-3075651 processed_transcript
  ENST00000582016 MYOM1-005 3119972-3129581 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000261606ENST00000356443ENST00000400569ENST00000581075ENST00000582016
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000261606 1.248±0.00 2.074±0.00 N/A 0.601±0.44 5.088±4.64 1.756±0.00 72.567±25.27 N/A 2.291±1.51 N/A 95.367±24.47 0.497±0.13 0.587±0.36 7.763±0.00
ENST00000356443 N/A N/A N/A 0.512±0.09 1.600±0.00 1.756±0.00 19.431±8.74 0.264±0.00 2.979±1.74 0.566±0.00 N/A 0.582±0.00 0.185±0.00 0.880±0.00
ENST00000400569 0.918±0.00 2.109±0.00 N/A N/A 3.886±0.00 6.708±0.00 89.383±0.00 N/A 0.769±0.00 0.301±0.00 112.773±0.00 0.617±0.32 0.361±0.17 1.820±0.00
ENST00000581075 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.641±0.00 0.629±0.00 4.621±0.00
ENST00000582016 N/A N/A 1.782±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 1.951±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00025P CIL_00025P_0002 CGP 18:3066807-3256236

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI:IEA protein binding
GO:0005863 TAS striated muscle myosin thick filament
GO:0006936 IEA muscle contraction
GO:0008307 TAS structural constituent of muscle
GO:0030017 IEA sarcomere
GO:0031430 ISS M band
GO:0042802 IPI identical protein binding
GO:0042803 ISS protein homodimerization activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000061249 myom1a myomesin 1a (skelemin) protein_coding Danio_rerio
ENSDARG00000076821 MYOM1 (2 of 2) myomesin 1 protein_coding Danio_rerio
ENSMUSG00000024049 Myom1 myomesin 1 protein_coding Mus_musculus

Loading