C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transducin (beta)-like 1X-linked
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000101849 TBL1X 9606 + X:9463295-9719743 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000217964 TBL1X-003 9465008-9719743 protein_coding
  ENST00000380961 TBL1X-002 9463329-9718862 protein_coding
  ENST00000407597 TBL1X-201 9463295-9719740 protein_coding
  ENST00000415293 TBL1X-005 9463331-9688037 protein_coding
  ENST00000422314 TBL1X-006 9465294-9684118 protein_coding
  ENST00000424279 TBL1X-202 9463295-9719740 protein_coding
  ENST00000441088 TBL1X-004 9463320-9654288 protein_coding
  ENST00000452824 TBL1X-001 9534943-9684070 protein_coding
  ENST00000497555 TBL1X-007 9639820-9645395 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000217964ENST00000380961ENST00000407597ENST00000422314ENST00000424279
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000217964 6.239±0.00 6.214±0.00 0.880±0.00 2.554±2.28 6.771±0.00 8.775±0.00 1.128±0.77 5.940±3.99 6.153±0.07 0.989±0.00 3.968±0.00 6.241±4.31 13.473±3.62 9.761±4.76
ENST00000380961 N/A N/A 0.555±0.00 N/A N/A N/A N/A N/A N/A 0.548±0.00 N/A 2.108±0.00 4.147±0.00 1.316±0.00
ENST00000407597 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.071±0.00 N/A N/A N/A N/A
ENST00000422314 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.607±0.00 N/A N/A N/A
ENST00000424279 0.818±0.00 N/A N/A N/A 3.539±0.00 N/A 0.426±0.00 N/A N/A N/A 1.472±0.82 2.832±0.00 4.124±0.00 N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000118 IDA histone deacetylase complex
GO:0000122 IDA negative regulation of transcription from RNA polymerase II promoter
GO:0003714 IDA transcription corepressor activity
GO:0005515 IPI:IEA protein binding
GO:0005634 IDA nucleus
GO:0005654 TAS nucleoplasm
GO:0005876 IDA spindle microtubule
GO:0006351 IEA transcription, DNA-templated
GO:0006508 IMP proteolysis
GO:0007219 TAS Notch signaling pathway
GO:0007605 IMP sensory perception of sound
GO:0008013 IPI beta-catenin binding
GO:0008022 IPI protein C-terminus binding
GO:0008134 IPI transcription factor binding
GO:0017053 IDA transcriptional repressor complex
GO:0019904 IPI protein domain specific binding
GO:0042393 IDA histone binding
GO:0043161 ISS proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0044212 IDA transcription regulatory region DNA binding
GO:0044255 TAS cellular lipid metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0045893 IDA positive regulation of transcription, DNA-templated
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter
GO:0060070 IMP canonical Wnt signaling pathway

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000060438 tbl1x transducin (beta)-like 1X-linked protein_coding Danio_rerio
ENSMUSG00000025246 Tbl1x transducin (beta)-like 1 X-linked protein_coding Mus_musculus

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