C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: transducin (beta)-like 1X-linked
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000217964 TBL1X-003 ENSG00000101849 9606 + X:9465008-9719743 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000217964
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000217964 6.239±0.00 6.214±0.00 0.880±0.00 2.554±2.28 6.771±0.00 8.775±0.00 1.128±0.77 5.940±3.99 6.153±0.07 0.989±0.00 3.968±0.00 6.241±4.31 13.473±3.62 9.761±4.76

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000118 IDA histone deacetylase complex
GO:0000122 IDA negative regulation of transcription from RNA polymerase II promoter
GO:0003714 IDA transcription corepressor activity
GO:0005515 IPI:IEA protein binding
GO:0005634 IDA nucleus
GO:0005654 TAS nucleoplasm
GO:0005876 IDA spindle microtubule
GO:0006351 IEA transcription, DNA-templated
GO:0006508 IMP proteolysis
GO:0007219 TAS Notch signaling pathway
GO:0007605 IMP sensory perception of sound
GO:0008013 IPI beta-catenin binding
GO:0008022 IPI protein C-terminus binding
GO:0008134 IPI transcription factor binding
GO:0017053 IDA transcriptional repressor complex
GO:0019904 IPI protein domain specific binding
GO:0042393 IDA histone binding
GO:0043161 ISS proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0044212 IDA transcription regulatory region DNA binding
GO:0044255 TAS cellular lipid metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0045893 IDA positive regulation of transcription, DNA-templated
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter
GO:0060070 IMP canonical Wnt signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000088217 Tbl1x-001 protein_coding Mus_musculus 0 1794
ENSMUST00000133893 Tbl1x-002 retained_intron Mus_musculus 0 730

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