C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: integrator complex subunit 6
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000102786 INTS6 9606 - 13:51354077-51454264 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000311234 INTS6-001 51365227-51452998 protein_coding
  ENST00000398119 INTS6-007 51361565-51453207 protein_coding
  ENST00000442263 INTS6-003 51436426-51453015 protein_coding
  ENST00000460868 INTS6-005 51382029-51384695 processed_transcript
  ENST00000461515 INTS6-002 51423003-51452251 processed_transcript
  ENST00000466784 INTS6-004 51402529-51423090 processed_transcript
  ENST00000469430 INTS6-010 51365199-51452791 nonsense_mediated_decay
  ENST00000476666 INTS6-021 51354077-51369131 processed_transcript
  ENST00000483288 INTS6-013 51430305-51454264 protein_coding
  ENST00000483441 INTS6-008 51365503-51384691 retained_intron
  ENST00000483746 INTS6-020 51379542-51384707 protein_coding
  ENST00000485178 INTS6-014 51430294-51453592 protein_coding
  ENST00000486195 INTS6-015 51387386-51452332 processed_transcript
  ENST00000488009 INTS6-016 51430235-51451574 protein_coding
  ENST00000490542 INTS6-006 51365736-51385264 protein_coding
  ENST00000491189 INTS6-018 51395299-51451567 protein_coding
  ENST00000491723 INTS6-009 51421176-51452650 processed_transcript
  ENST00000491997 INTS6-017 51423030-51451567 processed_transcript
  ENST00000493153 INTS6-019 51379509-51383741 retained_intron
  ENST00000497989 INTS6-011 51365228-51421374 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000311234ENST00000398119ENST00000442263ENST00000469430ENST00000483441ENST00000490542ENST00000497989
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000311234 1.856±0.00 N/A N/A 1.416±0.00 2.269±0.49 2.220±0.42 2.139±0.33 3.056±0.00 3.079±0.95 3.278±0.00 1.439±1.08 3.301±0.59 2.323±0.71 15.176±0.00
ENST00000398119 N/A 1.150±0.00 0.642±0.00 N/A 0.970±0.00 N/A N/A 1.606±0.00 1.785±0.00 2.827±0.00 N/A 1.109±0.00 N/A 2.307±0.00
ENST00000442263 0.225±0.00 0.384±0.00 0.384±0.00 0.431±0.13 1.180±0.00 0.173±0.00 N/A 0.967±0.57 N/A N/A 0.168±0.00 N/A 0.096±0.00 N/A
ENST00000469430 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.411±0.00 N/A 12.133±0.00
ENST00000483441 N/A N/A N/A N/A 3.289±0.00 N/A N/A N/A N/A N/A 0.480±0.00 N/A N/A N/A
ENST00000490542 N/A N/A N/A N/A N/A N/A 1.067±0.00 3.337±0.00 N/A N/A N/A N/A N/A N/A
ENST00000497989 N/A N/A N/A 2.109±0.00 2.463±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 5.222±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005GW CIL_0005GW_0001 CGP 13:51222334-51364735
CIL_0002DO CIL_0002DO_0001 CGP 13:51335773-51454264
CIL_0002J2 CIL_0002J2_0001 CGP 13:51354077-51767707

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004888 TAS transmembrane signaling receptor activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0007165 TAS signal transduction
GO:0015629 IDA actin cytoskeleton
GO:0016180 IDA snRNA processing
GO:0032039 IDA integrator complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000013025 ints6 integrator complex subunit 6 protein_coding Danio_rerio
ENSMUSG00000035161 Ints6 integrator complex subunit 6 protein_coding Mus_musculus

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