C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: integrator complex subunit 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000442263 INTS6-003 ENSG00000102786 9606 - 13:51436426-51453015 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyMusclePlacentaENST00000442263
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Muscle Placenta
ENST00000442263 0.225±0.00 0.384±0.00 0.384±0.00 0.431±0.13 1.180±0.00 0.173±0.00 0.967±0.57 0.168±0.00 0.096±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005GW CIL_0005GW_0001 CGP 13:51222334-51364735
CIL_0002DO CIL_0002DO_0001 CGP 13:51335773-51454264
CIL_0002J2 CIL_0002J2_0001 CGP 13:51354077-51767707

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004888 TAS transmembrane signaling receptor activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0007165 TAS signal transduction
GO:0015629 IDA actin cytoskeleton
GO:0016180 IDA snRNA processing
GO:0032039 IDA integrator complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000053959 Ints6-201 protein_coding Mus_musculus 0 1046
ENSMUST00000173269 Neu1-002 retained_intron Mus_musculus 0.00008 57

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