C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: coiled-coil domain containing 113
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000103021 CCDC113 9606 + 16:58231157-58283836 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000219299 CCDC113-001 58249936-58283836 protein_coding
  ENST00000443128 CCDC113-002 58249936-58283836 protein_coding
  ENST00000561517 CCDC113-004 58249952-58262540 nonsense_mediated_decay
  ENST00000566498 CCDC113-003 58249988-58252767 processed_transcript
  ENST00000569374 CCDC113-005 58231157-58254096 protein_coding
  ENST00000616795 CCDC113-201 58249977-58267549 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000219299ENST00000443128ENST00000616795
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000219299 0.246±0.00 0.638±0.00 0.103±0.00 3.819±0.68 0.724±0.03 0.228±0.05 0.450±0.00 0.213±0.19 0.265±0.11 2.932±1.28 0.404±0.00 2.277±2.01 0.667±0.15 10.190±5.57
ENST00000443128 N/A N/A N/A N/A N/A N/A 0.435±0.00 N/A 0.375±0.00 N/A 0.237±0.00 N/A N/A N/A
ENST00000616795 N/A N/A N/A 3.003±0.00 N/A 0.142±0.00 0.460±0.00 0.427±0.26 0.881±0.00 1.502±0.00 1.140±0.00 0.433±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008Z0 CIL_0008Z0_0001 VISTA 16:57818949-58421282
CIL_00052F CIL_00052F_0002 CGP 16:58157907-58283836
CIL_0004RV CIL_0004RV_0001 CGP 16:58231157-58295047

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0043234 IDA protein complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000006981 ccdc113 coiled-coil domain containing 113 protein_coding Danio_rerio
ENSMUSG00000036598 Ccdc113 coiled-coil domain containing 113 protein_coding Mus_musculus

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