C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00052F_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000013582-ENSDARG00000006981 CGP 7955 25:14071262-14100246
GeneTranscriptPositionBiotype
ENSDARG00000006981 (ccdc113)
coiled-coil domain containing 113 		ENSDART00000008989 (ccdc113-201) 14094635-14100246 protein_coding
ENSDARG00000013582 (ck2a2b)
casein kinase 2 alpha 2b 		ENSDART00000045488 (ck2a2b-201) 14071262-14090315 protein_coding
CIL_00052F_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000070770-ENSG00000103021 CGP 9606 16:58157907-58283836
GeneTranscriptPositionBiotype
ENSG00000070770 (CSNK2A2)
casein kinase 2, alpha prime polypeptide 		ENST00000262506 (CSNK2A2-001) 58157907-58197920 protein_coding
ENST00000562367 (CSNK2A2-004) 58174018-58196773 retained_intron
ENST00000563307 (CSNK2A2-002) 58159551-58167713 protein_coding
ENST00000565188 (CSNK2A2-006) 58174475-58197878 protein_coding
ENST00000566813 (CSNK2A2-003) 58157907-58192886 processed_transcript
ENST00000567730 (CSNK2A2-005) 58158117-58186856 protein_coding
ENSG00000103021 (CCDC113)
coiled-coil domain containing 113 		ENST00000219299 (CCDC113-001) 58249936-58283836 protein_coding
ENST00000443128 (CCDC113-002) 58249936-58283836 protein_coding
ENST00000561517 (CCDC113-004) 58249952-58262540 nonsense_mediated_decay
ENST00000566498 (CCDC113-003) 58249988-58252767 processed_transcript
ENST00000569374 (CCDC113-005) 58231157-58254096 protein_coding
ENST00000616795 (CCDC113-201) 58249977-58267549 protein_coding
ENSG00000240863 (RN7SL645P)
RNA, 7SL, cytoplasmic 645, pseudogene 		ENST00000496148 (RN7SL645P-201) 58199568-58199836 misc_RNA
ENSG00000260867 (RP11-459F6.1)
 ENST00000561923 (RP11-459F6.1-001) 58197112-58217805 antisense
ENSG00000260927 (RP11-459F6.3)
 ENST00000569580 (RP11-459F6.3-001) 58129529-58159133 antisense
CIL_00052F_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000046707-ENSMUSG00000036598 CGP 10090 8:95446096-95558888
GeneTranscriptPositionBiotype
ENSMUSG00000036598 (Ccdc113)
coiled-coil domain containing 113 		ENSMUST00000041569 (Ccdc113-201) 95534100-95558888 protein_coding
ENSMUSG00000046707 (Csnk2a2)
casein kinase 2, alpha prime polypeptide 		ENSMUST00000056919 (Csnk2a2-201) 95446096-95488820 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00052F_0001ENSDARG00000006981ENSDART00000008989ENSDARG00000013582ENSDART00000045488CIL_00052F_0002ENSG00000070770ENST00000262506ENST00000562367ENST00000563307ENST00000565188ENST00000566813ENST00000567730ENSG00000103021ENST00000219299ENST00000443128ENST00000561517ENST00000566498ENST00000569374ENST00000616795ENSG00000240863ENST00000496148ENSG00000260867ENST00000561923ENSG00000260927ENST00000569580CIL_00052F_0003ENSMUSG00000036598ENSMUST00000041569ENSMUSG00000046707ENSMUST00000056919
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00052F_0001ENSDARG00000006981ENSDART00000008989ENSDARG00000013582ENSDART00000045488CIL_00052F_0002ENSG00000070770ENST00000262506ENST00000563307ENST00000567730ENSG00000103021ENST00000219299ENST00000443128ENST00000616795ENSG00000240863ENST00000496148ENSG00000260867ENST00000561923ENSG00000260927ENST00000569580CIL_00052F_0003ENSMUSG00000036598ENSMUST00000041569ENSMUSG00000046707ENSMUST00000056919
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000006981 ENSDART00000008989 N/A N/A N/A 1.034±0.22 N/A N/A 0.817±0.77 2.800±0.00 N/A N/A 0.470±0.00 N/A N/A N/A
ENSDARG00000013582 ENSDART00000045488 N/A N/A N/A 8.223±8.09 N/A N/A 5.893±3.49 10.305±0.00 0.476±0.00 N/A 1.996±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000070770 ENST00000262506 12.276±0.00 5.760±0.00 1.278±0.00 4.785±3.43 12.866±0.00 13.404±11.85 7.677±0.00 10.265±0.00 4.361±0.00 7.961±6.65 21.734±0.00 12.726±6.27 10.032±1.45 106.595±32.95
ENST00000562367 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000563307 6.156±0.00 8.167±0.00 1.250±0.00 3.659±1.02 4.871±3.46 3.692±1.35 1.461±0.85 4.637±0.53 2.699±1.07 3.416±1.89 1.927±0.00 7.465±3.02 5.297±1.27 9.054±1.21
ENST00000565188 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566813 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567730 N/A N/A N/A N/A 5.525±0.00 6.119±3.56 4.831±0.00 N/A N/A N/A N/A N/A N/A 30.459±0.00
ENSG00000103021 ENST00000219299 0.246±0.00 0.638±0.00 0.103±0.00 3.819±0.68 0.724±0.03 0.228±0.05 0.450±0.00 0.213±0.19 0.265±0.11 2.932±1.28 0.404±0.00 2.277±2.01 0.667±0.15 10.190±5.57
ENST00000443128 N/A N/A N/A N/A N/A N/A 0.435±0.00 N/A 0.375±0.00 N/A 0.237±0.00 N/A N/A N/A
ENST00000561517 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566498 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569374 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000616795 N/A N/A N/A 3.003±0.00 N/A 0.142±0.00 0.460±0.00 0.427±0.26 0.881±0.00 1.502±0.00 1.140±0.00 0.433±0.00 N/A N/A
ENSG00000240863 ENST00000496148 N/A 0.074±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000260867 ENST00000561923 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.504±0.24
ENSG00000260927 ENST00000569580 0.053±0.00 N/A N/A 0.438±0.00 0.029±0.00 0.027±0.00 0.131±0.00 0.086±0.00 0.132±0.11 N/A N/A 0.080±0.01 0.201±0.07 1.030±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000036598 ENSMUST00000041569 0.162±0.08 0.181±0.11 0.409±0.01 1.987±2.35 0.060±0.00 0.113±0.03 0.085±0.04 0.081±0.04 0.011±0.00 2.060±0.89 0.023±0.00 1.832±1.40 0.078±0.07 129.088±137.28
ENSMUSG00000046707 ENSMUST00000056919 1.666±0.93 0.803±0.04 2.548±0.24 2.469±0.27 1.810±1.23 1.178±0.26 1.471±0.14 2.307±0.23 0.972±0.41 1.568±0.20 1.267±0.38 2.179±1.34 4.843±3.16 4.051±1.00

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