C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: proteasome (prosome, macropain) 26S subunit, non-ATPase, 7
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000103035 PSMD7 9606 + 16:74296775-74306288 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000219313 PSMD7-001 74296775-74306288 protein_coding
  ENST00000563150 PSMD7-006 74303989-74305606 retained_intron
  ENST00000566015 PSMD7-003 74296815-74300477 retained_intron
  ENST00000567958 PSMD7-004 74296821-74305513 protein_coding
  ENST00000568615 PSMD7-005 74296829-74304709 protein_coding
  ENST00000568717 PSMD7-002 74296820-74305888 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000219313ENST00000567958ENST00000568615ENST00000568717
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000219313 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.592±0.00 N/A N/A N/A N/A
ENST00000567958 32.781±0.00 25.364±0.00 2.923±0.00 18.421±8.13 18.116±9.45 12.344±4.91 15.652±11.00 8.975±0.00 11.877±1.65 24.524±0.00 23.145±16.41 36.419±14.15 48.382±18.43 41.059±12.23
ENST00000568615 N/A N/A N/A N/A N/A N/A 2.382±0.00 N/A N/A 3.943±0.00 8.420±0.00 5.665±0.00 N/A N/A
ENST00000568717 17.540±0.00 19.785±0.00 2.252±0.00 13.028±7.37 10.075±5.64 11.321±6.93 12.929±10.72 12.391±7.07 8.355±3.16 11.357±0.00 16.114±13.29 13.970±11.03 41.950±17.54 25.631±9.56

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00090U CIL_00090U_0001 VISTA 16:73974670-74575347

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000082 TAS G1/S transition of mitotic cell cycle
GO:0000209 TAS protein polyubiquitination
GO:0000278 TAS mitotic cell cycle
GO:0000502 IDA proteasome complex
GO:0002474 TAS antigen processing and presentation of peptide antigen via MHC class I
GO:0002479 TAS antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent
GO:0005515 IPI:IEA protein binding
GO:0005634 IDA nucleus
GO:0005654 TAS nucleoplasm
GO:0005829 TAS cytosol
GO:0005838 IEA proteasome regulatory particle
GO:0006521 TAS regulation of cellular amino acid metabolic process
GO:0006915 TAS apoptotic process
GO:0006977 TAS DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest
GO:0010467 TAS gene expression
GO:0016020 IDA membrane
GO:0016032 TAS viral process
GO:0016070 TAS RNA metabolic process
GO:0016071 TAS mRNA metabolic process
GO:0031145 TAS anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process
GO:0034641 TAS cellular nitrogen compound metabolic process
GO:0042590 TAS antigen processing and presentation of exogenous peptide antigen via MHC class I
GO:0042803 IDA protein homodimerization activity
GO:0042981 TAS regulation of apoptotic process
GO:0043066 TAS negative regulation of apoptotic process
GO:0044281 TAS small molecule metabolic process
GO:0051436 TAS negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle
GO:0051437 TAS positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle
GO:0051439 TAS regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000068076 psmd7 proteasome (prosome, macropain) 26S subunit, non-ATPase, 7 (Mov34 homolog) protein_coding Danio_rerio
ENSMUSG00000039067 Psmd7 proteasome (prosome, macropain) 26S subunit, non-ATPase, 7 protein_coding Mus_musculus

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