C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00090U_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs723 VISTA 9606 16:73974670-74575347
GeneTranscriptPositionBiotype
ENSG00000090863 (GLG1)
golgi glycoprotein 1 		ENST00000205061 (GLG1-001) 74451958-74607114 protein_coding
ENST00000422840 (GLG1-002) 74451959-74607094 protein_coding
ENST00000447066 (GLG1-003) 74452027-74607112 protein_coding
ENST00000561481 (GLG1-006) 74461489-74468405 retained_intron
ENST00000561942 (GLG1-013) 74453189-74458294 retained_intron
ENST00000562090 (GLG1-004) 74452790-74607105 nonsense_mediated_decay
ENST00000563432 (GLG1-011) 74467759-74472492 retained_intron
ENST00000563646 (GLG1-012) 74461784-74463439 retained_intron
ENST00000565260 (GLG1-008) 74503736-74607097 protein_coding
ENST00000565474 (GLG1-009) 74496600-74563325 protein_coding
ENST00000566601 (GLG1-005) 74468254-74472950 retained_intron
ENST00000567911 (GLG1-010) 74474172-74477533 retained_intron
ENST00000567951 (GLG1-007) 74452790-74607098 nonsense_mediated_decay
ENSG00000103035 (PSMD7)
proteasome (prosome, macropain) 26S subunit, non-ATPase, 7 		ENST00000219313 (PSMD7-001) 74296775-74306288 protein_coding
ENST00000563150 (PSMD7-006) 74303989-74305606 retained_intron
ENST00000566015 (PSMD7-003) 74296815-74300477 retained_intron
ENST00000567958 (PSMD7-004) 74296821-74305513 protein_coding
ENST00000568615 (PSMD7-005) 74296829-74304709 protein_coding
ENST00000568717 (PSMD7-002) 74296820-74305888 nonsense_mediated_decay
ENSG00000140839 (CLEC18B)
C-type lectin domain family 18, member B 		ENST00000339953 (CLEC18B-001) 74408631-74421392 protein_coding
ENST00000425714 (CLEC18B-002) 74411887-74421470 retained_intron
ENST00000564842 (CLEC18B-003) 74411353-74412799 retained_intron
ENST00000617101 (CLEC18B-201) 74408270-74421756 protein_coding
ENST00000619275 (CLEC18B-202) 74408270-74421953 protein_coding
ENST00000620745 (CLEC18B-203) 74408633-74421404 protein_coding
ENSG00000196436 (NPIPB15)
nuclear pore complex interacting protein family, member B15 		ENST00000429990 (NPIPB15-001) 74377878-74392080 protein_coding
ENST00000613038 (NPIPB15-004) 74381309-74381765 retained_intron
ENSG00000207525 (Y_RNA)
Y RNA 		ENST00000384794 (Y_RNA.1-779) 74463888-74463988 misc_RNA
ENSG00000214331 (RP11-252A24.2)
 ENST00000429810 (RP11-252A24.2-003) 74337944-74368240 retained_intron
ENST00000563377 (RP11-252A24.2-001) 74332567-74360859 transcribed_unprocessed_pseudogene
ENST00000565724 (RP11-252A24.2-007) 74334892-74344818 retained_intron
ENST00000566802 (RP11-252A24.2-002) 74332402-74368161 retained_intron
ENST00000568371 (RP11-252A24.2-006) 74367035-74368148 retained_intron
ENSG00000239763 (AC009120.3)
 ENST00000493458 (AC009120.3-001) 74312609-74313390 processed_pseudogene
ENSG00000240861 (RP11-572F4.1)
 ENST00000485799 (RP11-572F4.1-001) 74552251-74552746 processed_pseudogene
ENSG00000251794 (RNU6-237P)
RNA, U6 small nuclear 237, pseudogene 		ENST00000515985 (RNU6-237P-201) 74456541-74456611 snRNA
ENSG00000260471 (AC009120.8)
 ENST00000563335 (AC009120.8-001) 74220929-74221427 processed_pseudogene
ENSG00000260539 (GLG1)
golgi glycoprotein 1 		ENST00000566788 (GLG1-001) 74447427-74449892 lincRNA
ENSG00000260884 (AC009120.5)
 ENST00000564455 (AC009120.5-001) 74313337-74315634 lincRNA
ENSG00000261170 (RP11-252A24.5)
 ENST00000566506 (RP11-252A24.5-002) 74422130-74434699 antisense
ENST00000567148 (RP11-252A24.5-001) 74422120-74435254 antisense
ENSG00000261248 (AC009120.10)
 ENST00000561669 (AC009120.10-001) 74282415-74287519 lincRNA
ENSG00000261404 (AC009120.4)
 ENST00000562888 (AC009120.4-003) 74206095-74296762 lincRNA
ENST00000568137 (AC009120.4-001) 74192392-74215521 lincRNA
ENST00000569389 (AC009120.4-002) 74054151-74296751 lincRNA
ENSG00000275236 (AC009120.11)
 ENST00000616116 (AC009120.11-001) 74289593-74291052 lincRNA
ENSG00000279100 (AC009120.9)
 ENST00000623452 (AC009120.9-001) 74150520-74151299 TEC
ENSG00000279420 (RP11-42H13.1)
 ENST00000624202 (RP11-42H13.1-001) 74053365-74053965 TEC

Homo sapiens Ensembl (GRCh38)

Genome
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Genes
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CIL_00090U_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs723 VISTA 10090 8:107303123-107903792
GeneTranscriptPositionBiotype
ENSMUSG00000003848 (Nob1)
NIN1/RPN12 binding protein 1 homolog (S. cerevisiae) 		ENSMUST00000003946 (Nob1-001) 107412489-107425049 protein_coding
ENSMUST00000076585 (Nob1-007) 107418056-107422327 processed_transcript
ENSMUST00000109273 (Nob1-008) 107418154-107418666 retained_intron
ENSMUST00000163757 (Nob1-006) 107416238-107424986 retained_intron
ENSMUST00000163973 (Nob1-003) 107417695-107425051 retained_intron
ENSMUST00000165266 (Nob1-005) 107418350-107425026 nonsense_mediated_decay
ENSMUST00000169311 (Nob1-002) 107412486-107425041 nonsense_mediated_decay
ENSMUST00000170796 (Nob1-004) 107412486-107421562 retained_intron
ENSMUSG00000003849 (Nqo1)
NAD(P)H dehydrogenase, quinone 1 		ENSMUST00000003947 (Nqo1-001) 107388225-107403206 protein_coding
ENSMUSG00000031930 (Wwp2)
WW domain containing E3 ubiquitin protein ligase 2 		ENSMUST00000166615 (Wwp2-201) 107436398-107558594 protein_coding
ENSMUSG00000039067 (Psmd7)
proteasome (prosome, macropain) 26S subunit, non-ATPase, 7 		ENSMUST00000044106 (Psmd7-201) 107580381-107588482 protein_coding
ENSMUSG00000059775 (Rps26-ps1)
ribosomal protein S26, pseudogene 1 		ENSMUST00000077208 (Rps26-ps1-201) 107439176-107439585 protein_coding
ENSMUSG00000094718 (Gm22825)
predicted gene, 22825 		ENSMUST00000179444 (Gm22825-201) 107842451-107842551 miRNA
ENSMUSG00000095727 (Gm23646)
predicted gene, 23646 		ENSMUST00000178119 (Gm23646-201) 107840957-107841057 miRNA

Mus musculus Ensembl (GRCm38)

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Transcripts
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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00090U_0001ENSG00000090863ENST00000205061ENST00000422840ENST00000447066ENST00000561481ENST00000561942ENST00000562090ENST00000563432ENST00000563646ENST00000565260ENST00000565474ENST00000566601ENST00000567911ENST00000567951ENSG00000103035ENST00000219313ENST00000563150ENST00000566015ENST00000567958ENST00000568615ENST00000568717ENSG00000140839ENST00000339953ENST00000425714ENST00000564842ENST00000617101ENST00000619275ENST00000620745ENSG00000196436ENST00000429990ENST00000613038ENSG00000207525ENST00000384794ENSG00000214331ENST00000429810ENST00000563377ENST00000565724ENST00000566802ENST00000568371ENSG00000239763ENST00000493458ENSG00000240861ENST00000485799ENSG00000251794ENST00000515985ENSG00000260471ENST00000563335ENSG00000260539ENST00000566788ENSG00000260884ENST00000564455ENSG00000261170ENST00000566506ENST00000567148ENSG00000261248ENST00000561669ENSG00000261404ENST00000562888ENST00000568137ENST00000569389ENSG00000275236ENST00000616116ENSG00000279100ENST00000623452ENSG00000279420ENST00000624202CIL_00090U_0002ENSMUSG00000003848ENSMUST00000003946ENSMUST00000076585ENSMUST00000109273ENSMUST00000163757ENSMUST00000163973ENSMUST00000165266ENSMUST00000169311ENSMUST00000170796ENSMUSG00000003849ENSMUST00000003947ENSMUSG00000031930ENSMUST00000166615ENSMUSG00000039067ENSMUST00000044106ENSMUSG00000059775ENSMUST00000077208ENSMUSG00000094718ENSMUST00000179444ENSMUSG00000095727ENSMUST00000178119
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00090U_0001ENSG00000090863ENST00000205061ENST00000422840ENST00000447066ENST00000567951ENSG00000103035ENST00000219313ENST00000567958ENST00000568615ENST00000568717ENSG00000140839ENST00000339953ENST00000425714ENST00000564842ENST00000619275ENST00000620745ENSG00000196436ENST00000429990ENST00000613038ENSG00000207525ENST00000384794ENSG00000214331ENST00000429810ENST00000566802ENSG00000239763ENST00000493458ENSG00000240861ENST00000485799ENSG00000251794ENST00000515985ENSG00000260471ENST00000563335ENSG00000260539ENST00000566788ENSG00000260884ENST00000564455ENSG00000261170ENST00000566506ENST00000567148ENSG00000261248ENST00000561669ENSG00000261404ENST00000562888ENST00000568137ENST00000569389ENSG00000275236ENST00000616116ENSG00000279100ENST00000623452ENSG00000279420ENST00000624202CIL_00090U_0002ENSMUSG00000003848ENSMUST00000003946ENSMUST00000076585ENSMUST00000163757ENSMUST00000170796ENSMUSG00000003849ENSMUST00000003947ENSMUSG00000031930ENSMUST00000166615ENSMUSG00000039067ENSMUST00000044106ENSMUSG00000059775ENSMUST00000077208ENSMUSG00000094718ENSMUST00000179444ENSMUSG00000095727ENSMUST00000178119
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000090863 ENST00000205061 N/A N/A 4.659±0.00 8.194±0.00 7.808±0.00 N/A 4.563±0.00 N/A N/A 2.852±0.00 N/A 4.749±0.00 N/A 14.197±0.00
ENST00000422840 39.827±0.00 29.816±0.00 N/A 14.239±8.83 15.605±7.76 29.561±0.00 8.802±5.12 17.100±13.05 5.644±2.14 16.451±10.79 22.218±0.00 23.494±16.02 40.506±4.65 26.516±12.16
ENST00000447066 N/A N/A N/A N/A N/A 7.075±0.00 N/A N/A N/A N/A N/A 5.693±0.49 8.067±0.00 19.730±0.00
ENST00000561481 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000561942 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000562090 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000563432 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000563646 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000565260 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000565474 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566601 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567911 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567951 N/A N/A 3.447±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000103035 ENST00000219313 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.592±0.00 N/A N/A N/A N/A
ENST00000563150 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566015 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567958 32.781±0.00 25.364±0.00 2.923±0.00 18.421±8.13 18.116±9.45 12.344±4.91 15.652±11.00 8.975±0.00 11.877±1.65 24.524±0.00 23.145±16.41 36.419±14.15 48.382±18.43 41.059±12.23
ENST00000568615 N/A N/A N/A N/A N/A N/A 2.382±0.00 N/A N/A 3.943±0.00 8.420±0.00 5.665±0.00 N/A N/A
ENST00000568717 17.540±0.00 19.785±0.00 2.252±0.00 13.028±7.37 10.075±5.64 11.321±6.93 12.929±10.72 12.391±7.07 8.355±3.16 11.357±0.00 16.114±13.29 13.970±11.03 41.950±17.54 25.631±9.56
ENSG00000140839 ENST00000339953 N/A N/A 0.650±0.00 0.009±0.00 N/A N/A N/A 0.571±0.00 N/A N/A N/A 0.046±0.00 N/A N/A
ENST00000425714 N/A N/A 0.179±0.00 N/A N/A 0.052±0.00 N/A 0.298±0.00 N/A N/A N/A 0.047±0.00 0.064±0.00 N/A
ENST00000564842 N/A 0.340±0.00 N/A 0.130±0.00 N/A N/A N/A N/A N/A N/A N/A 0.279±0.00 N/A 0.392±0.00
ENST00000617101 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000619275 N/A N/A N/A N/A 0.013±0.00 N/A 0.032±0.00 0.606±0.00 N/A N/A N/A N/A N/A 0.151±0.00
ENST00000620745 N/A N/A N/A 0.009±0.00 N/A N/A N/A N/A N/A N/A N/A 0.048±0.00 N/A 0.222±0.00
ENSG00000196436 ENST00000429990 0.011±0.00 0.024±0.00 N/A 0.127±0.08 0.737±0.07 N/A 0.171±0.03 0.590±0.45 0.267±0.13 0.675±0.03 0.380±0.29 2.044±2.23 0.543±0.12 4.551±1.16
ENST00000613038 0.190±0.00 0.398±0.00 N/A 0.468±0.00 0.180±0.00 0.191±0.00 0.214±0.17 N/A 1.443±0.00 0.836±0.55 0.182±0.00 0.747±0.31 N/A N/A
ENSG00000207525 ENST00000384794 0.406±0.00 0.606±0.00 N/A 1.213±0.00 0.579±0.00 N/A 0.364±0.00 N/A N/A N/A N/A N/A N/A 0.589±0.41
ENSG00000214331 ENST00000429810 N/A N/A N/A N/A 1.919±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000563377 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000565724 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566802 N/A N/A 2.799±0.00 N/A N/A N/A 1.014±0.00 N/A 2.171±0.00 1.606±0.00 N/A 1.614±0.00 N/A N/A
ENST00000568371 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000239763 ENST00000493458 0.789±0.00 N/A N/A 0.405±0.33 1.392±0.43 0.533±0.00 0.528±0.19 N/A 0.057±0.00 1.349±0.00 0.139±0.00 0.714±0.02 0.284±0.07 1.396±0.28
ENSG00000240861 ENST00000485799 N/A 0.037±0.00 N/A N/A 0.038±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000251794 ENST00000515985 0.527±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000260471 ENST00000563335 0.060±0.00 0.031±0.00 N/A 0.201±0.00 0.064±0.00 0.029±0.00 N/A 0.031±0.00 0.028±0.00 0.414±0.27 N/A 0.141±0.00 N/A 0.078±0.01
ENSG00000260539 ENST00000566788 10.518±0.00 11.031±0.00 2.102±0.00 8.370±4.65 8.444±5.69 6.257±3.92 4.087±2.99 5.758±5.56 3.442±1.46 4.444±1.59 6.354±3.66 6.063±4.01 5.815±1.74 9.267±4.41
ENSG00000260884 ENST00000564455 0.736±0.00 N/A N/A 1.643±0.38 N/A 0.212±0.00 0.332±0.00 N/A 0.333±0.00 1.986±1.76 N/A 4.560±3.93 2.853±2.75 21.040±19.77
ENSG00000261170 ENST00000566506 N/A N/A 1.598±0.00 N/A N/A N/A N/A 0.676±0.00 N/A N/A 0.065±0.00 N/A N/A N/A
ENST00000567148 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.111±0.00 N/A 0.161±0.06
ENSG00000261248 ENST00000561669 0.028±0.00 0.112±0.00 0.856±0.00 0.090±0.00 0.164±0.00 0.052±0.00 0.113±0.06 0.028±0.00 N/A N/A N/A 0.190±0.14 N/A 0.156±0.00
ENSG00000261404 ENST00000562888 N/A N/A N/A 0.320±0.23 0.048±0.00 N/A N/A N/A N/A 0.477±0.00 N/A 0.130±0.00 0.345±0.00 N/A
ENST00000568137 N/A 0.031±0.00 N/A N/A 0.047±0.00 0.029±0.00 0.070±0.00 0.046±0.00 N/A N/A N/A 0.050±0.00 0.031±0.00 1.197±0.07
ENST00000569389 N/A N/A N/A 0.122±0.00 N/A N/A N/A 0.041±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000275236 ENST00000616116 0.112±0.00 0.175±0.00 0.315±0.00 0.068±0.00 0.075±0.05 0.071±0.02 0.115±0.03 0.155±0.05 0.029±0.00 0.085±0.00 N/A 0.042±0.01 0.020±0.01 0.493±0.28
ENSG00000279100 ENST00000623452 N/A 0.085±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.053±0.00
ENSG00000279420 ENST00000624202 N/A N/A N/A 0.070±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.382±0.13
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000003848 ENSMUST00000003946 11.544±4.60 7.656±1.06 12.641±2.50 14.740±6.39 6.932±1.58 7.075±1.75 7.614±0.45 9.530±0.64 10.905±7.74 6.143±0.97 9.628±0.44 20.594±4.66 15.227±6.42 4.804±2.08
ENSMUST00000076585 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.654±0.00
ENSMUST00000109273 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000163757 N/A 3.684±0.00 N/A 4.824±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 2.967±0.00 N/A
ENSMUST00000163973 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000165266 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000169311 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000170796 0.990±0.00 4.289±0.13 4.977±1.12 8.004±2.81 3.338±0.35 3.146±0.00 1.516±0.43 1.672±0.16 3.007±1.92 N/A 1.517±0.27 4.501±1.20 3.926±1.70 1.331±0.00
ENSMUSG00000003849 ENSMUST00000003947 3.764±0.27 2.086±0.40 47.442±6.59 1.136±0.41 3.952±1.28 16.375±0.61 19.223±2.79 26.136±2.86 8.357±3.28 6.423±2.39 13.732±3.66 3.828±1.43 3.734±2.66 1.042±0.37
ENSMUSG00000031930 ENSMUST00000166615 10.147±2.16 8.783±2.85 7.476±0.21 11.197±2.71 10.830±2.23 24.598±8.35 5.103±0.81 17.146±1.25 7.359±1.82 16.312±1.25 2.683±0.51 17.478±3.30 9.716±2.82 13.708±9.51
ENSMUSG00000039067 ENSMUST00000044106 34.567±3.70 26.822±5.36 46.547±2.71 46.422±4.54 29.061±4.35 22.243±1.04 30.540±1.75 27.868±4.56 48.591±17.25 31.939±1.96 69.539±5.00 53.551±6.01 62.551±22.23 22.512±4.61
ENSMUSG00000059775 ENSMUST00000077208 30.947±14.33 7.510±1.31 1.928±0.90 35.149±42.20 13.254±2.14 14.245±0.98 6.150±0.00 10.263±2.92 6.201±4.68 8.243±0.05 0.442±0.11 14.766±14.03 1.160±0.66 27.067±21.46
ENSMUSG00000094718 ENSMUST00000179444 N/A N/A N/A 13.407±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000095727 ENSMUST00000178119 N/A N/A N/A 13.407±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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