C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier family 7, member 6 opposite strand
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000103061 SLC7A6OS 9606 - 16:68284503-68310951 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000263997 SLC7A6OS-001 68298035-68310945 protein_coding
  ENST00000561590 SLC7A6OS-003 68302000-68304229 protein_coding
  ENST00000561933 SLC7A6OS-002 68298166-68310946 retained_intron
  ENST00000568315 SLC7A6OS-004 68284503-68304131 nonsense_mediated_decay
  ENST00000568538 SLC7A6OS-005 68303690-68310822 protein_coding
  ENST00000619380 SLC7A6OS-201 68301041-68310951 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000263997ENST00000561933
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000263997 18.112±0.00 6.874±0.00 2.094±0.03 6.423±1.45 4.877±0.00 6.022±4.72 4.181±0.00 0.955±0.00 3.912±0.00 6.492±2.67 5.548±0.95 11.396±1.03 3.934±0.13
ENST00000561933 N/A 7.522±0.00 N/A 5.903±0.00 2.490±0.18 0.641±0.00 3.513±2.12 N/A 2.672±1.08 9.790±0.00 3.030±2.13 5.933±0.00 5.018±1.40

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000FI CIL_0000FI_0001 CGP 16:68245304-68301823
CIL_00055A CIL_00055A_0001 CGP 16:68264516-68310951
CIL_0000CE CIL_0000CE_0001 CGP 16:68284503-68358563

Gene Ontology
GO IDEvidence TypeGO Description
GO:0002244 IEA hematopoietic progenitor cell differentiation
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0015031 IEA protein transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000010596 slc7a6os solute carrier family 7, member 6 opposite strand protein_coding Danio_rerio
ENSMUSG00000033106 Slc7a6os solute carrier family 7, member 6 opposite strand protein_coding Mus_musculus

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