C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00055A_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000103064-ENSG00000103061 CGP 9606 16:68264516-68310951
GeneTranscriptPositionBiotype
ENSG00000103061 (SLC7A6OS)
solute carrier family 7, member 6 opposite strand 		ENST00000263997 (SLC7A6OS-001) 68298035-68310945 protein_coding
ENST00000561590 (SLC7A6OS-003) 68302000-68304229 protein_coding
ENST00000561933 (SLC7A6OS-002) 68298166-68310946 retained_intron
ENST00000568315 (SLC7A6OS-004) 68284503-68304131 nonsense_mediated_decay
ENST00000568538 (SLC7A6OS-005) 68303690-68310822 protein_coding
ENST00000619380 (SLC7A6OS-201) 68301041-68310951 protein_coding
ENSG00000103064 (SLC7A6)
solute carrier family 7 (amino acid transporter light chain, y+L system), member 6 		ENST00000219343 (SLC7A6-001) 68264530-68301819 protein_coding
ENST00000379152 (SLC7A6-004) 68264548-68301819 nonsense_mediated_decay
ENST00000562727 (SLC7A6-005) 68265516-68274798 protein_coding
ENST00000562863 (SLC7A6-013) 68291286-68294747 retained_intron
ENST00000563080 (SLC7A6-002) 68266591-68291658 nonsense_mediated_decay
ENST00000563146 (SLC7A6-014) 68266602-68275001 protein_coding
ENST00000563208 (SLC7A6-011) 68290962-68294801 retained_intron
ENST00000564708 (SLC7A6-009) 68264582-68274948 protein_coding
ENST00000566454 (SLC7A6-003) 68264560-68301819 protein_coding
ENST00000566579 (SLC7A6-010) 68274869-68291578 nonsense_mediated_decay
ENST00000566834 (SLC7A6-007) 68264550-68287343 protein_coding
ENST00000567325 (SLC7A6-015) 68294678-68297433 retained_intron
ENST00000567346 (SLC7A6-012) 68287760-68294907 nonsense_mediated_decay
ENST00000568024 (SLC7A6-006) 68272979-68275095 protein_coding
ENST00000568088 (SLC7A6-008) 68264569-68274811 protein_coding
ENST00000618043 (SLC7A6-201) 68264516-68301823 protein_coding
ENSG00000252026 (RNU6-1262P)
RNA, U6 small nuclear 1262, pseudogene 		ENST00000516217 (RNU6-1262P-201) 68284223-68284318 snRNA
ENSG00000279649 (RP11-96D1.8)
 ENST00000623181 (RP11-96D1.8-001) 68290087-68292790 TEC

Homo sapiens Ensembl (GRCh38)

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Structures from Ensembl
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Structures from Ensembl
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CIL_00055A_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000031904-ENSMUSG00000033106 CGP 10090 8:106168875-106210933
GeneTranscriptPositionBiotype
ENSMUSG00000031904 (Slc7a6)
solute carrier family 7 (cationic amino acid transporter, y+ system), member 6 		ENSMUST00000034378 (Slc7a6-201) 106168875-106198704 protein_coding
ENSMUSG00000033106 (Slc7a6os)
solute carrier family 7, member 6 opposite strand 		ENSMUST00000035925 (Slc7a6os-201) 106200438-106210933 protein_coding

Mus musculus Ensembl (GRCm38)

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Structures from Ensembl
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Transcripts
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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00055A_0001ENSG00000103061ENST00000263997ENST00000561590ENST00000561933ENST00000568315ENST00000568538ENST00000619380ENSG00000103064ENST00000219343ENST00000379152ENST00000562727ENST00000562863ENST00000563080ENST00000563146ENST00000563208ENST00000564708ENST00000566454ENST00000566579ENST00000566834ENST00000567325ENST00000567346ENST00000568024ENST00000568088ENST00000618043ENSG00000252026ENST00000516217ENSG00000279649ENST00000623181CIL_00055A_0002ENSMUSG00000031904ENSMUST00000034378ENSMUSG00000033106ENSMUST00000035925
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00055A_0001ENSG00000103061ENST00000263997ENST00000561933ENSG00000103064ENST00000219343ENST00000566454ENST00000618043ENSG00000252026ENST00000516217ENSG00000279649ENST00000623181CIL_00055A_0002ENSMUSG00000031904ENSMUST00000034378ENSMUSG00000033106ENSMUST00000035925
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000103061 ENST00000263997 18.112±0.00 6.874±0.00 N/A 2.094±0.03 6.423±1.45 4.877±0.00 6.022±4.72 4.181±0.00 0.955±0.00 3.912±0.00 6.492±2.67 5.548±0.95 11.396±1.03 3.934±0.13
ENST00000561590 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000561933 N/A 7.522±0.00 N/A N/A 5.903±0.00 2.490±0.18 0.641±0.00 3.513±2.12 N/A 2.672±1.08 9.790±0.00 3.030±2.13 5.933±0.00 5.018±1.40
ENST00000568315 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000568538 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000619380 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000103064 ENST00000219343 N/A N/A N/A N/A 2.048±0.00 N/A 1.586±0.85 N/A 0.144±0.00 N/A N/A 0.746±0.00 2.676±0.00 N/A
ENST00000379152 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000562727 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000562863 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000563080 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000563146 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000563208 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000564708 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566454 N/A N/A N/A 0.463±0.00 N/A N/A N/A N/A 0.757±0.00 N/A 3.066±0.00 1.184±0.00 N/A 1.178±0.00
ENST00000566579 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566834 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567325 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567346 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000568024 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000568088 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000618043 N/A N/A N/A 0.802±0.00 1.814±0.00 N/A N/A N/A N/A N/A 1.448±0.00 N/A N/A N/A
ENSG00000252026 ENST00000516217 0.494±0.00 1.792±0.00 N/A N/A 1.262±0.00 0.484±0.00 0.467±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000279649 ENST00000623181 N/A N/A 0.630±0.00 N/A N/A 1.055±0.00 N/A N/A 1.083±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031904 ENSMUST00000034378 14.761±1.59 10.135±2.26 15.895±2.55 15.016±9.22 13.669±1.97 6.044±0.87 3.703±0.34 2.846±0.47 1.531±1.56 8.657±0.40 2.635±0.34 25.686±8.25 9.267±7.16 13.418±8.35
ENSMUSG00000033106 ENSMUST00000035925 6.357±1.39 6.390±2.09 8.162±0.63 13.947±3.64 6.904±1.97 6.519±2.08 2.135±0.63 3.889±0.60 5.450±3.21 6.571±0.48 3.665±0.52 13.957±6.24 21.024±14.38 10.277±10.01

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