C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: C-x(9)-C motif containing 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000103121 CMC2 9606 - 16:80966448-81020270 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000219400 CMC2-001 80966448-81007114 protein_coding
  ENST00000486645 CMC2-002 80975802-81006895 protein_coding
  ENST00000561614 CMC2-006 80975802-80997372 nonsense_mediated_decay
  ENST00000562713 CMC2-022 80976117-81006858 protein_coding
  ENST00000562828 CMC2-010 80980789-81006892 processed_transcript
  ENST00000563779 CMC2-003 80975801-80998949 retained_intron
  ENST00000564174 CMC2-015 80976060-81006854 protein_coding
  ENST00000564249 CMC2-017 80975853-80998659 protein_coding
  ENST00000565108 CMC2-021 80976050-81006886 protein_coding
  ENST00000565514 CMC2-013 80980830-81006873 processed_transcript
  ENST00000565613 CMC2-020 80976110-81006854 nonsense_mediated_decay
  ENST00000565650 CMC2-009 80975928-81006894 protein_coding
  ENST00000565914 CMC2-007 80976003-81020270 protein_coding
  ENST00000565925 CMC2-011 80976050-81006875 protein_coding
  ENST00000566047 CMC2-005 80975802-80997595 retained_intron
  ENST00000566231 CMC2-012 80975802-80991955 processed_transcript
  ENST00000566918 CMC2-018 80975801-80983335 processed_transcript
  ENST00000567593 CMC2-016 80975936-81006839 nonsense_mediated_decay
  ENST00000568228 CMC2-008 80975991-81006894 nonsense_mediated_decay
  ENST00000569187 CMC2-004 80975804-81006897 processed_transcript
  ENST00000569666 CMC2-023 80976111-80997607 retained_intron
  ENST00000570086 CMC2-019 80975807-81006875 nonsense_mediated_decay
  ENST00000570195 CMC2-014 80975802-81006871 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000219400ENST00000486645ENST00000562828ENST00000563779ENST00000564249ENST00000565108ENST00000565650ENST00000565914ENST00000566047ENST00000566231ENST00000567593ENST00000569187ENST00000570195
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000219400 N/A 0.295±0.00 0.089±0.00 0.611±0.20 0.284±0.00 0.365±0.00 0.172±0.00 0.296±0.00 0.175±0.00 0.162±0.00 0.090±0.00 0.207±0.02 N/A N/A
ENST00000486645 N/A N/A N/A N/A N/A 6.881±0.00 11.463±0.00 12.839±0.00 N/A 9.587±0.00 3.224±0.00 11.786±0.00 8.973±0.32 N/A
ENST00000562828 7.701±0.00 N/A N/A N/A N/A N/A 6.623±0.00 N/A 10.903±0.00 N/A 7.962±0.00 N/A 9.616±0.00 N/A
ENST00000563779 N/A N/A 0.478±0.00 N/A 1.029±0.00 1.294±0.00 0.921±0.00 N/A N/A 0.731±0.00 N/A N/A N/A N/A
ENST00000564249 N/A N/A N/A N/A N/A N/A N/A N/A 1.579±0.00 N/A N/A N/A N/A N/A
ENST00000565108 N/A N/A N/A N/A N/A 9.721±0.00 N/A N/A N/A 20.792±0.00 N/A N/A N/A N/A
ENST00000565650 N/A N/A N/A 4.882±0.00 N/A N/A N/A 6.400±0.00 N/A N/A N/A 9.137±0.00 8.552±3.14 42.601±0.00
ENST00000565914 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.174±0.00 N/A N/A 66.135±0.00
ENST00000566047 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.606±0.00 N/A N/A N/A N/A
ENST00000566231 N/A N/A N/A N/A N/A N/A N/A 6.562±0.00 N/A N/A N/A N/A N/A N/A
ENST00000567593 N/A N/A N/A N/A N/A N/A N/A 4.561±0.00 1.418±0.00 N/A N/A N/A N/A N/A
ENST00000569187 10.065±0.00 9.558±0.00 N/A 32.627±0.00 11.773±0.00 8.396±0.00 28.198±0.00 19.517±0.00 20.327±0.00 22.209±0.00 7.880±0.00 15.921±3.31 11.393±3.25 56.511±2.82
ENST00000570195 N/A N/A N/A 5.146±0.00 N/A N/A N/A N/A N/A N/A 2.256±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001PZ CIL_0001PZ_0001 CGP 16:80597906-81020270
CIL_0004YC CIL_0004YC_0002 CGP 16:80966448-81033114

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005739 IDA mitochondrion

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000043635 cmc2 COX assembly mitochondrial protein 2 homolog (S. cerevisiae) protein_coding Danio_rerio
ENSMUSG00000014633 Cmc2 COX assembly mitochondrial protein 2 protein_coding Mus_musculus

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