C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004YC_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000043635-ENSDARG00000043640 CGP 7955 18:29838897-29855499
GeneTranscriptPositionBiotype
ENSDARG00000043640 (cenpn)
centromere protein N 		ENSDART00000064080 (cenpn-001) 29848444-29855499 protein_coding
CIL_0004YC_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000103121-ENSG00000166451 CGP 9606 16:80966448-81033114
GeneTranscriptPositionBiotype
ENSG00000103121 (CMC2)
C-x(9)-C motif containing 2 		ENST00000219400 (CMC2-001) 80966448-81007114 protein_coding
ENST00000486645 (CMC2-002) 80975802-81006895 protein_coding
ENST00000561614 (CMC2-006) 80975802-80997372 nonsense_mediated_decay
ENST00000562713 (CMC2-022) 80976117-81006858 protein_coding
ENST00000562828 (CMC2-010) 80980789-81006892 processed_transcript
ENST00000563779 (CMC2-003) 80975801-80998949 retained_intron
ENST00000564174 (CMC2-015) 80976060-81006854 protein_coding
ENST00000564249 (CMC2-017) 80975853-80998659 protein_coding
ENST00000565108 (CMC2-021) 80976050-81006886 protein_coding
ENST00000565514 (CMC2-013) 80980830-81006873 processed_transcript
ENST00000565613 (CMC2-020) 80976110-81006854 nonsense_mediated_decay
ENST00000565650 (CMC2-009) 80975928-81006894 protein_coding
ENST00000565914 (CMC2-007) 80976003-81020270 protein_coding
ENST00000565925 (CMC2-011) 80976050-81006875 protein_coding
ENST00000566047 (CMC2-005) 80975802-80997595 retained_intron
ENST00000566231 (CMC2-012) 80975802-80991955 processed_transcript
ENST00000566918 (CMC2-018) 80975801-80983335 processed_transcript
ENST00000567593 (CMC2-016) 80975936-81006839 nonsense_mediated_decay
ENST00000568228 (CMC2-008) 80975991-81006894 nonsense_mediated_decay
ENST00000569187 (CMC2-004) 80975804-81006897 processed_transcript
ENST00000569666 (CMC2-023) 80976111-80997607 retained_intron
ENST00000570086 (CMC2-019) 80975807-81006875 nonsense_mediated_decay
ENST00000570195 (CMC2-014) 80975802-81006871 protein_coding
ENSG00000166451 (CENPN)
centromere protein N 		ENST00000299572 (CENPN-003) 81006552-81022885 protein_coding
ENST00000305850 (CENPN-001) 81006498-81029322 protein_coding
ENST00000393335 (CENPN-002) 81007214-81033114 protein_coding
ENST00000428963 (CENPN-005) 81007244-81028660 protein_coding
ENST00000439957 (CENPN-004) 81007207-81029309 protein_coding
ENST00000562943 (CENPN-009) 81017755-81022874 protein_coding
ENST00000564669 (CENPN-007) 81007257-81020276 protein_coding
ENST00000568445 (CENPN-008) 81007263-81017836 nonsense_mediated_decay
ENST00000569461 (CENPN-006) 81007223-81020146 processed_transcript
ENSG00000261061 (RP11-303E16.2)
 ENST00000566639 (RP11-303E16.2-002) 81030770-81031485 sense_intronic
ENSG00000278985 (RP11-303E16.9)
 ENST00000623577 (RP11-303E16.9-001) 80982319-80984094 TEC
CIL_0004YC_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000014633-ENSMUSG00000031756 CGP 10090 8:116888685-116941503
GeneTranscriptPositionBiotype
ENSMUSG00000014633 (Cmc2)
COX assembly mitochondrial protein 2 		ENSMUST00000078589 (Cmc2-008) 116889533-116921439 protein_coding
ENSMUST00000128304 (Cmc2-007) 116889632-116921365 protein_coding
ENSMUST00000131616 (Cmc2-002) 116889279-116921422 nonsense_mediated_decay
ENSMUST00000134356 (Cmc2-004) 116889615-116921446 processed_transcript
ENSMUST00000148235 (Cmc2-001) 116888685-116921455 protein_coding
ENSMUST00000150128 (Cmc2-003) 116889518-116921447 nonsense_mediated_decay
ENSMUST00000155260 (Cmc2-005) 116888685-116894524 retained_intron
ENSMUSG00000031756 (Cenpn)
centromere protein N 		ENSMUST00000034205 (Cenpn-201) 116921740-116941503 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004YC_0001ENSDARG00000043640ENSDART00000064080CIL_0004YC_0002ENSG00000103121ENST00000219400ENST00000486645ENST00000561614ENST00000562713ENST00000562828ENST00000563779ENST00000564174ENST00000564249ENST00000565108ENST00000565514ENST00000565613ENST00000565650ENST00000565914ENST00000565925ENST00000566047ENST00000566231ENST00000566918ENST00000567593ENST00000568228ENST00000569187ENST00000569666ENST00000570086ENST00000570195ENSG00000166451ENST00000299572ENST00000305850ENST00000393335ENST00000428963ENST00000439957ENST00000562943ENST00000564669ENST00000568445ENST00000569461ENSG00000261061ENST00000566639ENSG00000278985ENST00000623577CIL_0004YC_0003ENSMUSG00000014633ENSMUST00000078589ENSMUST00000128304ENSMUST00000131616ENSMUST00000134356ENSMUST00000148235ENSMUST00000150128ENSMUST00000155260ENSMUSG00000031756ENSMUST00000034205
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004YC_0001ENSDARG00000043640ENSDART00000064080CIL_0004YC_0002ENSG00000103121ENST00000219400ENST00000486645ENST00000562828ENST00000563779ENST00000564249ENST00000565108ENST00000565650ENST00000565914ENST00000566047ENST00000566231ENST00000567593ENST00000569187ENST00000570195ENSG00000166451ENST00000299572ENST00000305850ENST00000439957ENSG00000261061ENST00000566639ENSG00000278985ENST00000623577CIL_0004YC_0003ENSMUSG00000014633ENSMUST00000078589ENSMUST00000128304ENSMUST00000131616ENSMUST00000134356ENSMUST00000148235ENSMUST00000155260ENSMUSG00000031756ENSMUST00000034205
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000043640 ENSDART00000064080 N/A N/A N/A 0.608±0.18 N/A N/A 0.226±0.08 1.539±2.12 0.259±0.00 N/A 0.100±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000103121 ENST00000219400 N/A 0.295±0.00 0.089±0.00 0.611±0.20 0.284±0.00 0.365±0.00 0.172±0.00 0.296±0.00 0.175±0.00 0.162±0.00 0.090±0.00 0.207±0.02 N/A N/A
ENST00000486645 N/A N/A N/A N/A N/A 6.881±0.00 11.463±0.00 12.839±0.00 N/A 9.587±0.00 3.224±0.00 11.786±0.00 8.973±0.32 N/A
ENST00000561614 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000562713 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000562828 7.701±0.00 N/A N/A N/A N/A N/A 6.623±0.00 N/A 10.903±0.00 N/A 7.962±0.00 N/A 9.616±0.00 N/A
ENST00000563779 N/A N/A 0.478±0.00 N/A 1.029±0.00 1.294±0.00 0.921±0.00 N/A N/A 0.731±0.00 N/A N/A N/A N/A
ENST00000564174 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000564249 N/A N/A N/A N/A N/A N/A N/A N/A 1.579±0.00 N/A N/A N/A N/A N/A
ENST00000565108 N/A N/A N/A N/A N/A 9.721±0.00 N/A N/A N/A 20.792±0.00 N/A N/A N/A N/A
ENST00000565514 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000565613 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000565650 N/A N/A N/A 4.882±0.00 N/A N/A N/A 6.400±0.00 N/A N/A N/A 9.137±0.00 8.552±3.14 42.601±0.00
ENST00000565914 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.174±0.00 N/A N/A 66.135±0.00
ENST00000565925 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566047 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.606±0.00 N/A N/A N/A N/A
ENST00000566231 N/A N/A N/A N/A N/A N/A N/A 6.562±0.00 N/A N/A N/A N/A N/A N/A
ENST00000566918 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567593 N/A N/A N/A N/A N/A N/A N/A 4.561±0.00 1.418±0.00 N/A N/A N/A N/A N/A
ENST00000568228 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569187 10.065±0.00 9.558±0.00 N/A 32.627±0.00 11.773±0.00 8.396±0.00 28.198±0.00 19.517±0.00 20.327±0.00 22.209±0.00 7.880±0.00 15.921±3.31 11.393±3.25 56.511±2.82
ENST00000569666 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000570086 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000570195 N/A N/A N/A 5.146±0.00 N/A N/A N/A N/A N/A N/A 2.256±0.00 N/A N/A N/A
ENSG00000166451 ENST00000299572 N/A N/A N/A N/A N/A 3.280±0.00 N/A N/A 0.644±0.00 N/A 1.602±0.00 4.405±0.00 3.268±0.39 18.143±0.00
ENST00000305850 1.344±0.00 1.607±0.00 N/A 1.189±0.00 1.730±0.00 N/A 2.065±1.61 2.652±0.00 1.845±0.00 N/A N/A 2.174±1.05 3.228±0.00 N/A
ENST00000393335 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000428963 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000439957 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.321±0.00 N/A N/A
ENST00000562943 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000564669 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000568445 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569461 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000261061 ENST00000566639 1.192±0.00 1.470±0.00 0.178±0.00 0.836±0.40 1.153±0.78 0.520±0.38 1.136±1.11 1.556±0.96 2.049±1.94 1.120±0.36 0.584±0.31 0.922±0.51 2.088±0.54 1.803±1.09
ENSG00000278985 ENST00000623577 N/A 1.420±0.00 N/A N/A N/A 2.441±0.00 N/A N/A N/A 1.628±0.00 N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000014633 ENSMUST00000078589 N/A N/A 2.165±0.00 13.094±0.00 N/A 1.431±0.00 N/A 3.741±0.16 7.405±4.70 2.015±0.00 7.080±1.85 4.917±5.24 12.080±8.44 6.322±3.69
ENSMUST00000128304 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.396±0.00 N/A N/A
ENSMUST00000131616 N/A N/A N/A N/A N/A N/A N/A N/A 3.325±0.00 N/A N/A N/A 2.363±0.00 N/A
ENSMUST00000134356 N/A N/A N/A 10.241±0.00 N/A N/A N/A N/A N/A N/A N/A 16.308±12.64 14.323±8.71 29.616±0.00
ENSMUST00000148235 5.833±0.93 5.927±1.10 3.286±0.33 2.459±1.00 3.603±0.58 3.660±0.48 10.600±1.54 6.127±0.40 6.098±4.33 3.512±0.47 5.742±0.71 2.314±0.72 3.739±2.49 3.461±0.15
ENSMUST00000150128 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155260 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.222±0.00 N/A N/A
ENSMUSG00000031756 ENSMUST00000034205 0.545±0.08 1.575±0.48 0.969±0.19 5.717±1.42 1.164±0.16 1.434±0.60 0.350±0.13 0.520±0.13 8.384±9.24 0.441±0.21 0.270±0.10 3.509±1.69 8.459±5.95 67.348±26.37

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