C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: coactosin-like F-actin binding protein 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000103187 COTL1 9606 - 16:84565594-84618077 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000262428 COTL1-001 84565594-84618077 protein_coding
  ENST00000561707 COTL1-006 84566550-84590479 retained_intron
  ENST00000564057 COTL1-002 84565659-84618059 protein_coding
  ENST00000564662 COTL1-005 84590125-84618075 retained_intron
  ENST00000567278 COTL1-003 84565602-84577096 processed_transcript
  ENST00000567786 COTL1-007 84616004-84617559 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000262428ENST00000561707ENST00000564057ENST00000567278
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000262428 23.146±0.00 63.955±0.00 17.738±0.00 7.725±0.29 13.245±3.57 6.416±0.40 3.652±0.00 11.202±5.69 5.344±1.15 26.555±15.60 2.021±0.59 27.980±16.54 89.094±32.84 18.441±0.00
ENST00000561707 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 95.461±0.00 159.944±0.00 28.467±0.00
ENST00000564057 63.812±0.00 115.767±0.00 N/A 51.873±0.00 51.987±0.00 24.732±0.00 8.199±0.00 32.444±0.00 11.571±0.00 95.296±0.00 3.922±0.00 41.930±21.62 65.352±47.14 29.886±7.40
ENST00000567278 N/A N/A N/A N/A N/A N/A N/A 0.179±0.00 N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002K5 CIL_0002K5_0001 CGP 16:84476421-84618077
CIL_0002K4 CIL_0002K4_0001 CGP 16:84565594-84667686

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003779 IDA:IEA actin binding
GO:0005515 IPI protein binding
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0008150 ND biological_process
GO:0016020 IEA membrane
GO:0019899 IPI enzyme binding
GO:0050832 IEA defense response to fungus
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000026829 cotl1 coactosin-like 1 (Dictyostelium) protein_coding Danio_rerio
ENSMUSG00000031827 Cotl1 coactosin-like 1 (Dictyostelium) protein_coding Mus_musculus

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