C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: coactosin-like F-actin binding protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000262428 COTL1-001 ENSG00000103187 9606 - 16:84565594-84618077 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000262428
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000262428 23.146±0.00 63.955±0.00 17.738±0.00 7.725±0.29 13.245±3.57 6.416±0.40 3.652±0.00 11.202±5.69 5.344±1.15 26.555±15.60 2.021±0.59 27.980±16.54 89.094±32.84 18.441±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002K5 CIL_0002K5_0001 CGP 16:84476421-84618077
CIL_0002K4 CIL_0002K4_0001 CGP 16:84565594-84667686

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003779 IDA:IEA actin binding
GO:0005515 IPI protein binding
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0008150 ND biological_process
GO:0016020 IEA membrane
GO:0019899 IPI enzyme binding
GO:0050832 IEA defense response to fungus
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000168698 Cotl1-202 protein_coding Mus_musculus 0 521
ENSMUST00000034285 Cotl1-201 protein_coding Mus_musculus 0 521

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