C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: lipase maturation factor 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000103227 LMF1 9606 - 16:853634-981318 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000262301 LMF1-001 853634-970999 protein_coding
  ENST00000543238 LMF1-005 853643-970960 protein_coding
  ENST00000545827 LMF1-003 853638-981318 nonsense_mediated_decay
  ENST00000562226 LMF1-002 879688-970982 nonsense_mediated_decay
  ENST00000562380 LMF1-012 910980-964122 protein_coding
  ENST00000565198 LMF1-015 870874-893252 retained_intron
  ENST00000565276 LMF1-008 854500-868968 nonsense_mediated_decay
  ENST00000566609 LMF1-011 952575-970982 processed_transcript
  ENST00000566627 LMF1-013 871287-947644 protein_coding
  ENST00000567595 LMF1-014 911016-970910 nonsense_mediated_decay
  ENST00000568268 LMF1-016 870833-887131 processed_transcript
  ENST00000568897 LMF1-006 854512-970866 protein_coding
  ENST00000568964 LMF1-004 881419-970963 nonsense_mediated_decay
  ENST00000569516 LMF1-007 854500-873860 retained_intron
  ENST00000570014 LMF1-010 871317-981297 protein_coding
  ENST00000570168 LMF1-017 869180-870749 processed_transcript
  ENST00000611669 LMF1-009 854501-855948 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000262301ENST00000543238ENST00000545827ENST00000565198ENST00000565276ENST00000566609ENST00000568897ENST00000569516ENST00000611669
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000262301 N/A 2.899±0.00 N/A N/A 2.288±0.00 0.251±0.00 1.025±0.00 2.509±0.00 N/A 2.258±0.00 N/A 6.607±1.69 2.948±0.59 1.893±0.81
ENST00000543238 2.733±0.00 3.070±0.00 N/A 5.084±4.24 N/A 1.287±0.00 N/A N/A 0.947±0.00 N/A N/A 5.058±0.00 N/A 2.657±0.00
ENST00000545827 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.991±0.00
ENST00000565198 N/A N/A N/A N/A 1.679±0.00 N/A N/A 1.312±0.00 N/A N/A N/A N/A N/A N/A
ENST00000565276 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.251±0.00 N/A N/A
ENST00000566609 5.974±0.00 N/A N/A N/A N/A N/A 2.131±0.00 N/A N/A 1.627±0.00 N/A N/A N/A N/A
ENST00000568897 7.001±0.00 6.377±0.00 1.002±0.00 N/A 3.192±2.28 2.713±0.00 0.950±0.46 3.306±2.32 1.896±1.16 5.073±0.00 1.752±0.53 2.118±2.02 3.882±0.44 2.771±1.05
ENST00000569516 N/A N/A N/A N/A N/A N/A N/A N/A 0.405±0.00 N/A N/A 1.264±0.00 N/A N/A
ENST00000611669 N/A N/A N/A N/A 0.726±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005789 IEA endoplasmic reticulum membrane
GO:0006888 IEA ER to Golgi vesicle-mediated transport
GO:0009306 IEA protein secretion
GO:0016021 IEA integral component of membrane
GO:0033578 IEA protein glycosylation in Golgi
GO:0034382 IEA chylomicron remnant clearance
GO:0051006 IEA positive regulation of lipoprotein lipase activity
GO:0051604 IEA protein maturation
GO:0090181 IEA regulation of cholesterol metabolic process
GO:0090207 IEA regulation of triglyceride metabolic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000075313 CABZ01073168.1 Uncharacterized protein protein_coding Danio_rerio
ENSMUSG00000002279 Lmf1 lipase maturation factor 1 protein_coding Mus_musculus

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