C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: lipase maturation factor 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000002279 Lmf1 10090 + 17:25579174-25662826 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000063344 Lmf1-201 25579174-25662826 protein_coding
  ENSMUST00000116641 Lmf1-001 25579177-25662826 protein_coding
  ENSMUST00000126164 Lmf1-006 25579187-25598556 retained_intron
  ENSMUST00000127280 Lmf1-004 25579199-25647596 retained_intron
  ENSMUST00000128146 Lmf1-005 25579199-25634842 retained_intron
  ENSMUST00000137201 Lmf1-002 25579187-25662723 nonsense_mediated_decay
  ENSMUST00000141606 Lmf1-008 25655415-25656450 protein_coding
  ENSMUST00000142264 Lmf1-007 25579199-25589224 retained_intron
  ENSMUST00000154842 Lmf1-003 25579197-25654854 protein_coding
  ENSMUST00000156868 Lmf1-009 25579320-25630682 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000063344ENSMUST00000116641ENSMUST00000137201ENSMUST00000156868
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000063344 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.028±0.00 N/A
ENSMUST00000116641 6.909±3.50 11.010±2.08 6.186±1.34 4.087±0.58 6.144±1.85 7.455±0.92 5.086±1.04 9.760±2.44 7.653±4.05 4.641±0.54 2.073±0.57 7.102±2.65 6.023±2.66 27.220±10.02
ENSMUST00000137201 N/A N/A 1.507±0.00 1.776±0.00 N/A N/A 4.009±0.53 N/A N/A N/A 2.459±0.59 4.036±0.84 4.217±0.00 N/A
ENSMUST00000156868 N/A N/A N/A N/A 11.047±0.00 N/A N/A N/A N/A N/A N/A 5.319±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000U6 CIL_0000U6_0002 CGP 17:25565892-25662826

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005789 IDA endoplasmic reticulum membrane
GO:0006888 IMP ER to Golgi vesicle-mediated transport
GO:0009306 IMP protein secretion
GO:0016021 IEA integral component of membrane
GO:0033578 IMP protein glycosylation in Golgi
GO:0034382 IMP chylomicron remnant clearance
GO:0051006 IDA positive regulation of lipoprotein lipase activity
GO:0051604 IDA protein maturation
GO:0090181 IMP regulation of cholesterol metabolic process
GO:0090207 IMP regulation of triglyceride metabolic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000075313 CABZ01073168.1 Uncharacterized protein protein_coding Danio_rerio
ENSG00000103227 LMF1 lipase maturation factor 1 protein_coding Homo_sapiens

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