C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: crystallin, mu
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000103316 CRYM 9606 - 16:21238874-21303083 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000219599 CRYM-001 21258521-21303051 protein_coding
  ENST00000543948 CRYM-201 21258518-21278960 protein_coding
  ENST00000570401 CRYM-003 21243872-21262158 protein_coding
  ENST00000571358 CRYM-005 21278175-21284104 protein_coding
  ENST00000571666 CRYM-007 21261292-21278245 retained_intron
  ENST00000572113 CRYM-008 21261083-21262336 retained_intron
  ENST00000572914 CRYM-006 21269857-21278525 protein_coding
  ENST00000574448 CRYM-002 21238874-21278275 nonsense_mediated_decay
  ENST00000574787 CRYM-009 21278721-21283712 processed_transcript
  ENST00000576703 CRYM-004 21261284-21303083 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000543948ENST00000570401ENST00000571358ENST00000571666ENST00000572113ENST00000574448ENST00000576703
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000543948 0.037±0.00 1.150±0.00 38.872±0.00 0.141±0.00 0.462±0.18 5.194±1.50 10.563±0.00 1.270±0.00 0.745±0.00 1.203±0.00 0.031±0.00 0.378±0.20 1.629±0.60
ENST00000570401 N/A N/A N/A N/A 0.633±0.00 N/A N/A N/A 0.456±0.00 N/A 0.331±0.00 N/A N/A
ENST00000571358 N/A N/A N/A 0.556±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000571666 N/A N/A N/A 0.155±0.00 0.364±0.00 N/A N/A N/A N/A N/A 0.187±0.00 N/A N/A
ENST00000572113 N/A N/A N/A N/A N/A N/A N/A N/A 0.414±0.00 N/A N/A N/A 3.333±0.00
ENST00000574448 0.107±0.00 N/A N/A 0.096±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000576703 N/A 2.065±0.00 N/A 0.098±0.00 N/A 3.063±0.00 1.154±0.00 1.479±0.00 N/A 0.020±0.00 0.793±0.71 0.511±0.01 6.193±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006HT CIL_0006HT_0001 CGP 16:21197450-21253845
CIL_0003H0 CIL_0003H0_0001 CGP 16:21233665-21303083

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000122 IMP negative regulation of transcription from RNA polymerase II promoter
GO:0003714 IMP transcription corepressor activity
GO:0004616 IEA phosphogluconate dehydrogenase (decarboxylating) activity
GO:0005634 IEA nucleus
GO:0005737 IDA cytoplasm
GO:0005739 IEA mitochondrion
GO:0006098 IEA pentose-phosphate shunt
GO:0007605 IMP sensory perception of sound
GO:0042403 IEA thyroid hormone metabolic process
GO:0042562 IEA hormone binding
GO:0042803 IDA protein homodimerization activity
GO:0047127 IEA thiomorpholine-carboxylate dehydrogenase activity
GO:0050661 IDA NADP binding
GO:0055114 IEA oxidation-reduction process
GO:0070062 IDA extracellular vesicular exosome
GO:0070324 IMP thyroid hormone binding
GO:0070327 IMP thyroid hormone transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000062817 crym crystallin, mu protein_coding Danio_rerio
ENSMUSG00000030905 Crym crystallin, mu protein_coding Mus_musculus

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