C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: crystallin, mu
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000543948 CRYM-201 ENSG00000103316 9606 - 16:21258518-21278960 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000543948
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000543948 0.037±0.00 1.150±0.00 38.872±0.00 0.141±0.00 0.462±0.18 5.194±1.50 10.563±0.00 1.270±0.00 0.745±0.00 1.203±0.00 0.031±0.00 0.378±0.20 1.629±0.60

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006HT CIL_0006HT_0001 CGP 16:21197450-21253845
CIL_0003H0 CIL_0003H0_0001 CGP 16:21233665-21303083

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IMP negative regulation of transcription from RNA polymerase II promoter
GO:0003714 IMP transcription corepressor activity
GO:0004616 IEA phosphogluconate dehydrogenase (decarboxylating) activity
GO:0005737 IDA cytoplasm
GO:0006098 IEA pentose-phosphate shunt
GO:0007605 IMP sensory perception of sound
GO:0042803 IDA protein homodimerization activity
GO:0047127 IEA thiomorpholine-carboxylate dehydrogenase activity
GO:0050661 IDA NADP binding
GO:0055114 IEA oxidation-reduction process
GO:0070062 IDA extracellular vesicular exosome
GO:0070324 IMP thyroid hormone binding
GO:0070327 IMP thyroid hormone transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000033198 Crym-001 protein_coding Mus_musculus 0 1077
ENSMUST00000134067 Crym-002 retained_intron Mus_musculus 0 431

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