C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: glutamyl-tRNA synthetase 2, mitochondrial
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000103356 EARS2 9606 - 16:23522014-23557731 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000449606 EARS2-201 23522014-23557375 protein_coding
  ENST00000561859 EARS2-014 23544541-23557350 processed_transcript
  ENST00000562402 EARS2-012 23532748-23535449 retained_intron
  ENST00000562581 EARS2-007 23544514-23557353 nonsense_mediated_decay
  ENST00000562799 EARS2-004 23552207-23557350 retained_intron
  ENST00000563232 EARS2-003 23525024-23557344 protein_coding
  ENST00000563459 EARS2-001 23522017-23557350 protein_coding
  ENST00000563499 EARS2-011 23552192-23557355 nonsense_mediated_decay
  ENST00000564461 EARS2-010 23544508-23557054 processed_transcript
  ENST00000564501 EARS2-017 23525020-23557731 protein_coding
  ENST00000564668 EARS2-009 23535320-23557364 nonsense_mediated_decay
  ENST00000564759 EARS2-013 23523047-23523645 processed_transcript
  ENST00000564776 EARS2-016 23523037-23524084 processed_transcript
  ENST00000564987 EARS2-006 23522624-23550842 processed_transcript
  ENST00000564997 EARS2-015 23544565-23557364 nonsense_mediated_decay
  ENST00000565344 EARS2-008 23532547-23535218 retained_intron
  ENST00000566017 EARS2-005 23535274-23545262 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000449606ENST00000563232ENST00000563459ENST00000564987
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000449606 3.375±0.00 2.377±0.00 1.211±0.00 3.040±0.00 N/A 2.743±0.00 5.304±0.00 7.398±0.00 5.152±0.00 2.668±0.00 N/A 4.347±1.98 6.082±2.04 N/A
ENST00000563232 N/A N/A N/A N/A N/A N/A 1.935±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000563459 N/A N/A N/A N/A 1.814±0.00 N/A N/A N/A 1.948±0.00 1.803±0.00 N/A N/A N/A N/A
ENST00000564987 N/A 2.418±0.00 N/A N/A 4.899±0.00 N/A 1.282±0.00 1.845±0.00 N/A N/A 4.351±0.00 N/A N/A 13.644±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006D4 CIL_0006D4_0001 CGP 16:23463542-23557731
CIL_0006D3 CIL_0006D3_0001 CGP 16:23522014-23574389

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000049 IEA tRNA binding
GO:0000166 IEA nucleotide binding
GO:0004818 IDA:IEA glutamate-tRNA ligase activity
GO:0005524 IEA ATP binding
GO:0005737 IEA cytoplasm
GO:0005739 IDA mitochondrion
GO:0006418 TAS tRNA aminoacylation for protein translation
GO:0006424 IDA:IEA glutamyl-tRNA aminoacylation
GO:0010467 TAS gene expression
GO:0016876 IEA ligase activity, forming aminoacyl-tRNA and related compounds
GO:0043039 IEA tRNA aminoacylation
GO:0050561 IDA glutamate-tRNA(Gln) ligase activity
GO:0070127 IDA tRNA aminoacylation for mitochondrial protein translation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000043471 CABZ01117079.1 Uncharacterized protein protein_coding Danio_rerio
ENSMUSG00000030871 Ears2 glutamyl-tRNA synthetase 2 (mitochondrial)(putative) protein_coding Mus_musculus

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