C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: immunoglobulin superfamily, DCC subclass, member 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000103742 IGDCC4 9606 - 15:65381464-65423072 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000352385 IGDCC4-001 65381464-65423072 protein_coding
  ENST00000558048 IGDCC4-003 65381487-65385770 processed_transcript
  ENST00000558819 IGDCC4-005 65410366-65411085 retained_intron
  ENST00000559327 IGDCC4-002 65381487-65396429 retained_intron
  ENST00000560319 IGDCC4-006 65385616-65386645 retained_intron
  ENST00000561309 IGDCC4-004 65384848-65386031 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000352385ENST00000558048ENST00000559327ENST00000560319
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000352385 0.063±0.00 N/A 1.720±0.00 0.333±0.00 0.099±0.05 0.200±0.05 N/A 0.391±0.00 N/A 1.166±0.50 1.924±2.09 2.033±0.54 0.950±0.32
ENST00000558048 N/A N/A N/A 0.534±0.00 0.099±0.00 N/A 0.120±0.00 0.026±0.00 0.131±0.00 N/A 2.224±0.89 1.587±0.14 1.220±1.00
ENST00000559327 0.036±0.00 0.496±0.00 0.417±0.10 0.173±0.00 0.062±0.00 0.114±0.00 0.100±0.00 0.787±0.00 0.257±0.00 0.284±0.00 1.764±2.18 0.692±0.00 0.803±0.00
ENST00000560319 N/A N/A N/A N/A 0.505±0.00 N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007RY CIL_0007RY_0001 VISTA 15:64785331-65389080
CIL_0004TE CIL_0004TE_0002 CGP 15:65327127-65423072

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005886 IEA plasma membrane
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000076919 igdcc4 immunoglobulin superfamily, DCC subclass, member 4 protein_coding Danio_rerio
ENSMUSG00000032816 Igdcc4 immunoglobulin superfamily, DCC subclass, member 4 protein_coding Mus_musculus

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