C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0004TE_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000075158-ENSDARG00000076919 CGP 7955 7:32836048-33093904
GeneTranscriptPositionBiotype
ENSDARG00000075158 (igdcc3)
immunoglobulin superfamily, DCC subclass, member 3
ENSDART00000111388 (igdcc3-001) 32836048-32952676 protein_coding
ENSDART00000148819 (igdcc3-002) 32858914-32952721 retained_intron
ENSDARG00000076919 (igdcc4)
immunoglobulin superfamily, DCC subclass, member 4
ENSDART00000113467 (igdcc4-201) 32960173-33093904 protein_coding
CIL_0004TE_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000174498-ENSG00000103742 CGP 9606 15:65327127-65423072
GeneTranscriptPositionBiotype
ENSG00000103742 (IGDCC4)
immunoglobulin superfamily, DCC subclass, member 4
ENST00000352385 (IGDCC4-001) 65381464-65423072 protein_coding
ENST00000558048 (IGDCC4-003) 65381487-65385770 processed_transcript
ENST00000558819 (IGDCC4-005) 65410366-65411085 retained_intron
ENST00000559327 (IGDCC4-002) 65381487-65396429 retained_intron
ENST00000560319 (IGDCC4-006) 65385616-65386645 retained_intron
ENST00000561309 (IGDCC4-004) 65384848-65386031 retained_intron
ENSG00000174498 (IGDCC3)
immunoglobulin superfamily, DCC subclass, member 3
ENST00000327987 (IGDCC3-001) 65327127-65378040 protein_coding
ENST00000558354 (IGDCC3-002) 65329579-65356372 protein_coding
ENST00000559058 (IGDCC3-005) 65334771-65355911 protein_coding
ENST00000559231 (IGDCC3-003) 65331104-65334641 processed_transcript
ENST00000559947 (IGDCC3-004) 65373489-65375300 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004TE_0001ENSDARG00000075158ENSDART00000111388ENSDART00000148819ENSDARG00000076919ENSDART00000113467CIL_0004TE_0002ENSG00000103742ENST00000352385ENST00000558048ENST00000558819ENST00000559327ENST00000560319ENST00000561309ENSG00000174498ENST00000327987ENST00000558354ENST00000559058ENST00000559231ENST00000559947
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004TE_0001ENSDARG00000075158ENSDART00000111388ENSDART00000148819ENSDARG00000076919ENSDART00000113467CIL_0004TE_0002ENSG00000103742ENST00000352385ENST00000558048ENST00000559327ENST00000560319ENSG00000174498ENST00000327987ENST00000558354ENST00000559058ENST00000559947
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000075158 ENSDART00000111388 N/A N/A N/A N/A N/A N/A 0.088±0.00 0.244±0.00 0.063±0.00 N/A 0.040±0.00 N/A N/A N/A
ENSDART00000148819 N/A N/A N/A 0.729±0.00 N/A N/A N/A N/A N/A N/A 0.069±0.00 N/A N/A N/A
ENSDARG00000076919 ENSDART00000113467 N/A N/A N/A N/A N/A N/A 0.528±0.12 1.037±0.22 0.432±0.00 N/A 1.097±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000103742 ENST00000352385 0.063±0.00 N/A N/A 1.720±0.00 0.333±0.00 0.099±0.05 0.200±0.05 N/A 0.391±0.00 N/A 1.166±0.50 1.924±2.09 2.033±0.54 0.950±0.32
ENST00000558048 N/A N/A N/A N/A 0.534±0.00 0.099±0.00 N/A 0.120±0.00 0.026±0.00 0.131±0.00 N/A 2.224±0.89 1.587±0.14 1.220±1.00
ENST00000558819 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559327 0.036±0.00 0.496±0.00 N/A 0.417±0.10 0.173±0.00 0.062±0.00 0.114±0.00 0.100±0.00 0.787±0.00 0.257±0.00 0.284±0.00 1.764±2.18 0.692±0.00 0.803±0.00
ENST00000560319 N/A N/A N/A N/A N/A 0.505±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000561309 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000174498 ENST00000327987 0.009±0.00 0.024±0.00 0.058±0.00 0.320±0.00 N/A N/A N/A 0.095±0.00 N/A 0.005±0.00 N/A 0.282±0.25 4.174±2.72 0.453±0.27
ENST00000558354 N/A N/A N/A N/A N/A 0.030±0.00 N/A N/A N/A N/A N/A 0.097±0.02 N/A N/A
ENST00000559058 N/A N/A N/A N/A N/A N/A N/A 0.118±0.00 N/A N/A N/A N/A N/A N/A
ENST00000559231 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559947 0.067±0.00 0.346±0.00 N/A N/A 0.121±0.00 0.220±0.00 0.152±0.00 0.279±0.00 0.208±0.00 0.043±0.00 0.060±0.00 N/A N/A N/A

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