C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: tetratricopeptide repeat domain 23
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000103852 TTC23 9606 - 15:99136323-99251223 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000262074 TTC23-201 99136324-99241562 protein_coding
  ENST00000394129 TTC23-003 99155364-99251217 protein_coding
  ENST00000394132 TTC23-001 99136323-99249558 protein_coding
  ENST00000394135 TTC23-005 99137576-99251223 protein_coding
  ENST00000434594 TTC23-008 99137942-99175120 protein_coding
  ENST00000459771 TTC23-002 99136323-99249518 nonsense_mediated_decay
  ENST00000468436 TTC23-006 99228405-99249445 retained_intron
  ENST00000480371 TTC23-009 99137640-99161747 nonsense_mediated_decay
  ENST00000490671 TTC23-007 99241387-99249558 processed_transcript
  ENST00000490688 TTC23-010 99137853-99139742 retained_intron
  ENST00000494567 TTC23-004 99136406-99221864 retained_intron
  ENST00000558078 TTC23-016 99228545-99249607 protein_coding
  ENST00000558438 TTC23-013 99148512-99156279 processed_transcript
  ENST00000558663 TTC23-011 99137553-99251223 protein_coding
  ENST00000560235 TTC23-019 99228553-99249531 protein_coding
  ENST00000560279 TTC23-015 99218898-99251223 protein_coding
  ENST00000560772 TTC23-017 99221796-99249610 protein_coding
  ENST00000560860 TTC23-018 99219008-99249600 protein_coding
  ENST00000561365 TTC23-014 99218698-99251223 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000262074ENST00000394129ENST00000394132ENST00000394135ENST00000459771ENST00000494567ENST00000558078
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000262074 0.881±0.00 N/A N/A N/A 1.872±0.00 0.352±0.00 2.265±0.00 0.814±0.14 N/A N/A 1.354±0.00 1.695±0.00 1.621±0.00
ENST00000394129 N/A N/A N/A N/A N/A N/A N/A N/A 0.732±0.00 N/A N/A N/A N/A
ENST00000394132 0.763±0.00 1.247±0.00 0.578±0.00 1.099±0.00 1.564±0.66 0.494±0.00 1.468±0.00 1.029±0.78 1.525±0.00 0.395±0.00 0.924±0.17 1.278±0.48 2.722±0.07
ENST00000394135 N/A N/A N/A N/A 0.941±0.00 N/A 0.805±0.00 N/A 0.857±0.00 N/A 0.812±0.00 N/A 2.083±0.00
ENST00000459771 N/A N/A N/A 0.718±0.00 N/A N/A N/A 0.247±0.00 1.466±0.00 N/A 1.068±0.00 0.635±0.10 N/A
ENST00000494567 0.631±0.00 N/A N/A N/A 0.977±0.00 N/A N/A N/A 1.874±0.00 N/A 1.042±0.48 0.949±0.26 N/A
ENST00000558078 N/A N/A N/A N/A N/A N/A N/A N/A 1.696±0.00 N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009CO CIL_0009CO_0001 VISTA 15:98550452-99154111

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000022160 ttc23 tetratricopeptide repeat domain 23 protein_coding Danio_rerio
ENSMUSG00000030555 Ttc23 tetratricopeptide repeat domain 23 protein_coding Mus_musculus

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