C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0009CO_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
mm727 VISTA 9606 15:98550452-99154111
GeneTranscriptPositionBiotype
ENSG00000103852 (TTC23)
tetratricopeptide repeat domain 23 		ENST00000262074 (TTC23-201) 99136324-99241562 protein_coding
ENST00000394129 (TTC23-003) 99155364-99251217 protein_coding
ENST00000394132 (TTC23-001) 99136323-99249558 protein_coding
ENST00000394135 (TTC23-005) 99137576-99251223 protein_coding
ENST00000434594 (TTC23-008) 99137942-99175120 protein_coding
ENST00000459771 (TTC23-002) 99136323-99249518 nonsense_mediated_decay
ENST00000468436 (TTC23-006) 99228405-99249445 retained_intron
ENST00000480371 (TTC23-009) 99137640-99161747 nonsense_mediated_decay
ENST00000490671 (TTC23-007) 99241387-99249558 processed_transcript
ENST00000490688 (TTC23-010) 99137853-99139742 retained_intron
ENST00000494567 (TTC23-004) 99136406-99221864 retained_intron
ENST00000558078 (TTC23-016) 99228545-99249607 protein_coding
ENST00000558438 (TTC23-013) 99148512-99156279 processed_transcript
ENST00000558663 (TTC23-011) 99137553-99251223 protein_coding
ENST00000560235 (TTC23-019) 99228553-99249531 protein_coding
ENST00000560279 (TTC23-015) 99218898-99251223 protein_coding
ENST00000560772 (TTC23-017) 99221796-99249610 protein_coding
ENST00000560860 (TTC23-018) 99219008-99249600 protein_coding
ENST00000561365 (TTC23-014) 99218698-99251223 protein_coding
ENSG00000140443 (IGF1R)
insulin-like growth factor 1 receptor 		ENST00000268035 (IGF1R-001) 98648971-98964530 protein_coding
ENST00000557873 (IGF1R-012) 98873719-98896889 processed_transcript
ENST00000557938 (IGF1R-014) 98734712-98899546 processed_transcript
ENST00000558355 (IGF1R-017) 98707831-98891619 protein_coding
ENST00000558751 (IGF1R-005) 98952795-98957292 processed_transcript
ENST00000558762 (IGF1R-002) 98649044-98964529 protein_coding
ENST00000558898 (IGF1R-011) 98890341-98911398 protein_coding
ENST00000558947 (IGF1R-009) 98897286-98899576 processed_transcript
ENST00000559582 (IGF1R-008) 98900610-98913114 processed_transcript
ENST00000559925 (IGF1R-003) 98649582-98916955 retained_intron
ENST00000560144 (IGF1R-016) 98913176-98922242 nonsense_mediated_decay
ENST00000560186 (IGF1R-015) 98820866-98896919 processed_transcript
ENST00000560277 (IGF1R-013) 98820884-98896849 processed_transcript
ENST00000560343 (IGF1R-006) 98923782-98924636 retained_intron
ENST00000560432 (IGF1R-010) 98890542-98896886 processed_transcript
ENST00000560972 (IGF1R-004) 98924600-98935366 protein_coding
ENST00000561049 (IGF1R-007) 98916485-98923881 retained_intron
ENSG00000182253 (SYNM)
synemin, intermediate filament protein 		ENST00000328642 (SYNM-004) 99105080-99135583 protein_coding
ENST00000336292 (SYNM-001) 99105035-99135589 protein_coding
ENST00000560674 (SYNM-003) 99098217-99135593 protein_coding
ENST00000594047 (SYNM-002) 99105080-99135583 protein_coding
ENSG00000183571 (PGPEP1L)
pyroglutamyl-peptidase I-like 		ENST00000378919 (PGPEP1L-001) 98968280-99005562 protein_coding
ENST00000535714 (PGPEP1L-002) 98968230-99007795 protein_coding
ENSG00000259424 (RP11-35O15.1)
 ENST00000560221 (RP11-35O15.1-001) 98646951-98647371 antisense
ENSG00000259621 (RP11-654A16.1)
 ENST00000558736 (RP11-654A16.1-001) 98880659-98893535 antisense
ENSG00000261054 (RP11-6O2.4)
 ENST00000566974 (RP11-6O2.4-001) 99128832-99131806 antisense
ENSG00000261616 (RP11-6O2.3)
 ENST00000564527 (RP11-6O2.3-001) 99139317-99145370 antisense
ENSG00000264480 (MIR4714)
microRNA 4714 		ENST00000580728 (MIR4714-201) 98784426-98784502 miRNA
ENSG00000278022 (RP11-35O15.2)
 ENST00000618697 (RP11-35O15.2-001) 98660210-98660668 sense_intronic
ENSG00000278090 (RP11-6O2.2)
 ENST00000611654 (RP11-6O2.2-001) 99028538-99031053 lincRNA
CIL_0009CO_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
mm727 VISTA 10090 7:67827362-68430866
GeneTranscriptPositionBiotype
ENSMUSG00000005533 (Igf1r)
insulin-like growth factor I receptor 		ENSMUST00000005671 (Igf1r-201) 67952859-68226780 protein_coding
ENSMUSG00000030553 (Pgpep1l)
pyroglutamyl-peptidase I-like 		ENSMUST00000032770 (Pgpep1l-201) 68236608-68264233 protein_coding
ENSMUSG00000074071 (Fam169b)
family with sequence similarity 169, member B 		ENSMUST00000098378 (Fam169b-201) 68300113-68363087 lincRNA
ENSMUST00000125685 (Fam169b-001) 68273839-68363089 lincRNA
ENSMUST00000153458 (Fam169b-003) 68331124-68353725 lincRNA
ENSMUST00000153805 (Fam169b-002) 68275995-68353646 lincRNA
ENSMUSG00000086628 (Gm16157)
predicted gene 16157 		ENSMUST00000124813 (Gm16157-002) 68266952-68276594 lincRNA
ENSMUST00000135564 (Gm16157-001) 68266339-68275098 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0009CO_0001ENSG00000103852ENST00000262074ENST00000394129ENST00000394132ENST00000394135ENST00000434594ENST00000459771ENST00000468436ENST00000480371ENST00000490671ENST00000490688ENST00000494567ENST00000558078ENST00000558438ENST00000558663ENST00000560235ENST00000560279ENST00000560772ENST00000560860ENST00000561365ENSG00000140443ENST00000268035ENST00000557873ENST00000557938ENST00000558355ENST00000558751ENST00000558762ENST00000558898ENST00000558947ENST00000559582ENST00000559925ENST00000560144ENST00000560186ENST00000560277ENST00000560343ENST00000560432ENST00000560972ENST00000561049ENSG00000182253ENST00000328642ENST00000336292ENST00000560674ENST00000594047ENSG00000183571ENST00000378919ENST00000535714ENSG00000259424ENST00000560221ENSG00000259621ENST00000558736ENSG00000261054ENST00000566974ENSG00000261616ENST00000564527ENSG00000264480ENST00000580728ENSG00000278022ENST00000618697ENSG00000278090ENST00000611654CIL_0009CO_0002ENSMUSG00000005533ENSMUST00000005671ENSMUSG00000030553ENSMUST00000032770ENSMUSG00000074071ENSMUST00000098378ENSMUST00000125685ENSMUST00000153458ENSMUST00000153805ENSMUSG00000086628ENSMUST00000124813ENSMUST00000135564
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0009CO_0001ENSG00000103852ENST00000262074ENST00000394129ENST00000394132ENST00000394135ENST00000459771ENST00000494567ENST00000558078ENSG00000140443ENST00000268035ENST00000558762ENST00000558898ENST00000559925ENST00000560144ENSG00000182253ENST00000328642ENST00000336292ENST00000560674ENST00000594047ENSG00000183571ENST00000378919ENST00000535714ENSG00000259424ENST00000560221ENSG00000259621ENST00000558736ENSG00000261054ENST00000566974ENSG00000261616ENST00000564527ENSG00000264480ENST00000580728ENSG00000278022ENST00000618697ENSG00000278090ENST00000611654CIL_0009CO_0002ENSMUSG00000005533ENSMUST00000005671ENSMUSG00000030553ENSMUST00000032770ENSMUSG00000074071ENSMUST00000098378ENSMUST00000125685ENSMUST00000153458ENSMUSG00000086628ENSMUST00000124813ENSMUST00000135564
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000103852 ENST00000262074 0.881±0.00 N/A N/A N/A N/A 1.872±0.00 0.352±0.00 2.265±0.00 0.814±0.14 N/A N/A 1.354±0.00 1.695±0.00 1.621±0.00
ENST00000394129 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.732±0.00 N/A N/A N/A N/A
ENST00000394132 0.763±0.00 1.247±0.00 N/A 0.578±0.00 1.099±0.00 1.564±0.66 0.494±0.00 1.468±0.00 1.029±0.78 1.525±0.00 0.395±0.00 0.924±0.17 1.278±0.48 2.722±0.07
ENST00000394135 N/A N/A N/A N/A N/A 0.941±0.00 N/A 0.805±0.00 N/A 0.857±0.00 N/A 0.812±0.00 N/A 2.083±0.00
ENST00000434594 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000459771 N/A N/A N/A N/A 0.718±0.00 N/A N/A N/A 0.247±0.00 1.466±0.00 N/A 1.068±0.00 0.635±0.10 N/A
ENST00000468436 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480371 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000490671 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000490688 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494567 0.631±0.00 N/A N/A N/A N/A 0.977±0.00 N/A N/A N/A 1.874±0.00 N/A 1.042±0.48 0.949±0.26 N/A
ENST00000558078 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.696±0.00 N/A N/A N/A N/A
ENST00000558438 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000558663 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560235 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560279 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560772 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560860 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000561365 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000140443 ENST00000268035 3.709±0.00 N/A 4.980±0.00 2.196±0.00 1.820±0.00 1.680±0.00 1.739±0.00 2.908±0.00 N/A 2.430±0.72 2.136±0.00 3.845±0.00 0.964±0.08 2.291±0.00
ENST00000557873 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557938 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000558355 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000558751 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000558762 N/A 1.657±0.00 N/A 1.940±0.00 0.793±0.00 1.695±0.00 0.677±0.19 N/A 1.519±1.30 N/A 1.338±0.00 1.398±0.11 1.663±1.35 2.544±0.00
ENST00000558898 N/A N/A N/A N/A N/A N/A N/A 1.406±0.00 N/A N/A N/A N/A N/A N/A
ENST00000558947 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559582 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559925 N/A N/A N/A N/A 3.978±0.00 N/A 0.797±0.00 N/A 3.552±0.00 N/A N/A N/A N/A N/A
ENST00000560144 N/A N/A N/A N/A N/A N/A N/A 2.317±0.00 N/A N/A N/A N/A N/A N/A
ENST00000560186 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560277 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560343 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560432 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560972 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000561049 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000182253 ENST00000328642 9.447±0.00 30.196±0.00 0.442±0.00 10.578±5.58 28.263±8.01 111.313±87.25 32.492±19.99 1.584±1.37 59.034±58.64 7.150±3.63 86.141±29.37 3.222±1.51 5.018±0.99 14.453±11.24
ENST00000336292 7.182±0.00 20.480±0.00 N/A 5.626±4.34 11.266±2.54 40.321±27.72 13.172±11.21 1.165±0.74 30.839±30.55 4.687±3.28 15.525±0.00 1.095±0.66 1.947±0.56 5.991±5.18
ENST00000560674 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.036±0.00 N/A N/A N/A
ENST00000594047 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 23.432±0.00 N/A N/A N/A
ENSG00000183571 ENST00000378919 0.099±0.00 0.100±0.00 0.132±0.00 0.043±0.00 0.244±0.00 N/A 0.240±0.10 N/A 0.072±0.00 0.082±0.00 2.773±1.03 N/A 0.057±0.02 0.454±0.00
ENST00000535714 N/A 0.089±0.00 N/A 0.049±0.00 N/A N/A 0.253±0.00 0.179±0.00 N/A N/A 0.748±0.45 N/A N/A 1.063±0.98
ENSG00000259424 ENST00000560221 N/A N/A N/A 0.074±0.00 0.273±0.00 0.124±0.00 0.126±0.00 0.687±0.00 N/A N/A N/A 0.228±0.09 0.221±0.02 0.424±0.00
ENSG00000259621 ENST00000558736 N/A N/A N/A N/A N/A N/A 0.171±0.00 N/A N/A N/A 0.485±0.00 N/A N/A N/A
ENSG00000261054 ENST00000566974 12.979±0.00 35.085±0.00 2.487±0.00 14.394±6.58 28.304±0.00 78.681±35.58 42.867±24.48 1.835±0.07 162.944±162.65 6.118±2.04 71.047±24.86 3.411±1.88 7.190±4.32 21.395±0.32
ENSG00000261616 ENST00000564527 N/A N/A N/A 0.269±0.00 0.674±0.00 1.314±0.03 0.577±0.09 0.290±0.00 4.411±0.00 N/A 0.792±0.00 N/A N/A N/A
ENSG00000264480 ENST00000580728 N/A N/A N/A N/A N/A N/A N/A 0.372±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000278022 ENST00000618697 0.032±0.00 0.287±0.00 2.088±0.00 0.035±0.00 0.807±0.00 0.147±0.00 0.189±0.13 N/A 0.826±0.00 0.156±0.06 N/A 0.443±0.27 0.148±0.00 0.445±0.00
ENSG00000278090 ENST00000611654 0.021±0.00 0.075±0.00 0.231±0.00 0.092±0.00 0.085±0.00 0.020±0.00 0.021±0.00 0.037±0.00 0.028±0.00 0.035±0.02 0.033±0.00 0.061±0.03 0.017±0.00 0.528±0.23
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000005533 ENSMUST00000005671 1.255±0.41 12.224±2.51 N/A N/A 2.107±0.98 2.335±0.51 2.026±0.38 9.792±3.53 0.284±0.36 6.170±2.86 1.022±0.31 12.830±3.94 6.154±3.34 1.299±0.54
ENSMUSG00000030553 ENSMUST00000032770 0.081±0.00 0.185±0.00 0.760±0.28 0.080±0.00 0.229±0.14 0.079±0.00 0.108±0.05 0.308±0.22 0.132±0.14 0.295±0.11 1.177±0.43 0.324±0.20 0.352±0.33 0.182±0.07
ENSMUSG00000074071 ENSMUST00000098378 N/A 0.057±0.00 N/A 0.033±0.01 4.855±1.59 0.513±0.00 0.099±0.00 1.216±0.27 4.589±3.61 0.629±0.02 0.156±0.09 0.787±0.48 0.227±0.11 0.290±0.18
ENSMUST00000125685 N/A 0.095±0.02 N/A N/A 3.445±0.93 0.326±0.12 0.056±0.00 0.396±0.00 1.760±0.02 N/A N/A 0.347±0.00 N/A 0.507±0.00
ENSMUST00000153458 N/A N/A N/A N/A N/A 0.401±0.00 N/A N/A N/A N/A N/A 1.346±0.07 N/A N/A
ENSMUST00000153805 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000086628 ENSMUST00000124813 N/A N/A N/A N/A 0.221±0.00 N/A N/A 0.557±0.24 0.687±0.90 N/A N/A 0.096±0.00 0.384±0.00 0.080±0.00
ENSMUST00000135564 N/A N/A 0.008±0.00 0.008±0.00 0.145±0.05 N/A N/A 0.109±0.06 1.682±1.49 0.054±0.00 N/A 0.023±0.00 0.058±0.04 0.039±0.00

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