C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transglutaminase 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000104055 TGM5 9606 - 15:43232595-43266857 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000220420 TGM5-001 43232595-43266857 protein_coding
  ENST00000349114 TGM5-002 43233158-43266857 protein_coding
  ENST00000396996 TGM5-003 43233177-43239743 retained_intron
  ENST00000563838 TGM5-004 43239053-43241250 retained_intron
  ENST00000610827 TGM5-201 43232595-43260683 protein_coding
  ENST00000611276 TGM5-202 43232595-43260683 protein_coding
  ENST00000622115 TGM5-203 43233158-43260600 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000220420ENST00000349114ENST00000396996ENST00000563838ENST00000610827ENST00000611276ENST00000622115
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000220420 N/A N/A N/A 0.099±0.00 N/A N/A 0.018±0.00 N/A N/A 0.038±0.00 N/A 0.026±0.00
ENST00000349114 N/A N/A N/A N/A N/A N/A N/A 0.100±0.00 N/A 0.232±0.00 0.099±0.00 N/A
ENST00000396996 N/A 0.099±0.00 0.064±0.00 N/A 0.074±0.00 0.018±0.00 0.035±0.00 N/A N/A N/A N/A 0.082±0.03
ENST00000563838 N/A N/A 0.278±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000610827 N/A N/A N/A N/A N/A N/A 0.021±0.00 N/A N/A 0.045±0.00 N/A 0.030±0.00
ENST00000611276 0.235±0.00 N/A N/A N/A N/A N/A N/A N/A 0.013±0.00 N/A 0.138±0.00 0.132±0.00
ENST00000622115 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.110±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005YD CIL_0005YD_0001 CGP 15:43232595-43302255

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003810 IEA protein-glutamine gamma-glutamyltransferase activity
GO:0005737 IEA cytoplasm
GO:0006464 TAS cellular protein modification process
GO:0008544 TAS epidermis development
GO:0018149 IEA peptide cross-linking
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000074155 tgm5l transglutaminase 5, like protein_coding Danio_rerio
ENSDARG00000097651 tgm8 transglutaminase 8 protein_coding Danio_rerio
ENSMUSG00000053675 Tgm5 transglutaminase 5 protein_coding Mus_musculus

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