C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transglutaminase 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000053675 Tgm5 10090 - 2:121046111-121085841 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000028721 Tgm5-001 121046111-121085841 protein_coding
  ENSMUST00000142674 Tgm5-002 121074561-121085822 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000028721ENSMUST00000142674
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000028721 0.130±0.08 1.031±0.27 0.022±0.00 0.314±0.19 0.066±0.03 0.013±0.00 0.034±0.03 0.008±0.00 0.308±0.27 0.046±0.03 0.062±0.03 0.241±0.20 0.012±0.00
ENSMUST00000142674 0.139±0.08 N/A N/A N/A 0.215±0.11 0.007±0.00 0.018±0.01 N/A 0.044±0.00 N/A 0.099±0.04 N/A 0.024±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005YD CIL_0005YD_0002 CGP 2:121046111-121109795

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003810 IEA protein-glutamine gamma-glutamyltransferase activity
GO:0005575 ND cellular_component
GO:0005737 IEA cytoplasm
GO:0018149 IEA peptide cross-linking
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000074155 tgm5l transglutaminase 5, like protein_coding Danio_rerio
ENSDARG00000097651 tgm8 transglutaminase 8 protein_coding Danio_rerio
ENSG00000104055 TGM5 transglutaminase 5 protein_coding Homo_sapiens

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