C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: stathmin 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000104435 STMN2 9606 + 8:79610814-79666175 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000220876 STMN2-001 79610814-79666175 protein_coding
  ENST00000518111 STMN2-008 79611152-79665007 protein_coding
  ENST00000518491 STMN2-007 79611735-79664881 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000220876ENST00000518111ENST00000518491
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000220876 0.032±0.00 N/A 85.543±0.00 1.690±0.51 4.783±2.51 N/A N/A 0.028±0.00 N/A 0.176±0.13 0.248±0.10 0.231±0.00
ENST00000518111 N/A N/A N/A N/A N/A 0.055±0.04 N/A N/A N/A N/A 0.069±0.00 0.142±0.06
ENST00000518491 N/A 0.150±0.00 59.588±0.00 1.094±0.00 N/A N/A 0.072±0.00 0.196±0.14 0.464±0.00 0.446±0.00 0.107±0.00 0.464±0.34

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002OY CIL_0002OY_0001 CGP 8:79610814-79767863

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm
GO:0005768 IEA endosome
GO:0005794 IEA Golgi apparatus
GO:0007026 IDA negative regulation of microtubule depolymerization
GO:0010976 IDA positive regulation of neuron projection development
GO:0010977 IDA negative regulation of neuron projection development
GO:0016020 IEA membrane
GO:0030027 IDA lamellipodium
GO:0030426 IDA growth cone
GO:0031110 IEA regulation of microtubule polymerization or depolymerization
GO:0031115 IDA negative regulation of microtubule polymerization
GO:0031117 IDA positive regulation of microtubule depolymerization
GO:0031982 IEA vesicle
GO:0043005 IDA neuron projection
GO:0043025 IDA neuronal cell body
GO:0048306 IPI calcium-dependent protein binding
GO:0048471 IDA perinuclear region of cytoplasm
GO:1990090 IDA cellular response to nerve growth factor stimulus

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000027500 Stmn2 stathmin-like 2 protein_coding Mus_musculus

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