C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: armadillo repeat containing 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000104442 ARMC1 9606 - 8:65602456-65634217 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000276569 ARMC1-001 65602456-65634207 protein_coding
  ENST00000458464 ARMC1-201 65602459-65634217 protein_coding
  ENST00000518908 ARMC1-004 65605433-65634162 protein_coding
  ENST00000519352 ARMC1-003 65613338-65634177 protein_coding
  ENST00000523384 ARMC1-005 65613338-65634190 processed_transcript
  ENST00000528721 ARMC1-002 65604375-65634171 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000276569ENST00000458464ENST00000518908ENST00000523384ENST00000528721
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000276569 5.510±0.00 7.395±0.00 1.661±0.00 8.578±2.03 6.737±0.00 4.626±2.28 3.892±2.65 5.181±3.24 4.290±0.37 2.712±0.27 6.196±0.00 4.859±2.10 3.991±0.40 4.309±3.65
ENST00000458464 N/A N/A N/A N/A N/A 1.444±0.00 N/A N/A N/A N/A 0.272±0.00 N/A N/A N/A
ENST00000518908 N/A N/A 1.333±0.00 N/A N/A N/A N/A N/A 3.785±0.00 N/A N/A N/A N/A N/A
ENST00000523384 N/A N/A N/A 10.326±0.00 N/A 5.432±0.00 4.048±0.00 4.440±0.00 N/A N/A N/A N/A N/A N/A
ENST00000528721 N/A N/A N/A N/A 2.442±0.00 N/A N/A 2.166±0.00 N/A 3.887±0.00 1.324±0.00 N/A N/A 1.401±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003G9 CIL_0003G9_0001 CGP 8:64587763-65634217
CIL_0005LS CIL_0005LS_0002 CGP 8:65602456-65771261

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005488 IEA binding
GO:0005515 IEA protein binding
GO:0005739 IEA mitochondrion
GO:0030001 IEA metal ion transport
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000013861 armc1 armadillo repeat containing 1 protein_coding Danio_rerio
ENSMUSG00000027599 Armc1 armadillo repeat containing 1 protein_coding Mus_musculus

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