C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003G9_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000172817-ENSG00000104442 CGP 9606 8:64587763-65634217
GeneTranscriptPositionBiotype
ENSG00000104442 (ARMC1)
armadillo repeat containing 1 		ENST00000276569 (ARMC1-001) 65602456-65634207 protein_coding
ENST00000458464 (ARMC1-201) 65602459-65634217 protein_coding
ENST00000518908 (ARMC1-004) 65605433-65634162 protein_coding
ENST00000519352 (ARMC1-003) 65613338-65634177 protein_coding
ENST00000523384 (ARMC1-005) 65613338-65634190 processed_transcript
ENST00000528721 (ARMC1-002) 65604375-65634171 nonsense_mediated_decay
ENSG00000172817 (CYP7B1)
cytochrome P450, family 7, subfamily B, polypeptide 1 		ENST00000310193 (CYP7B1-001) 64596135-64798761 protein_coding
ENST00000523954 (CYP7B1-002) 64587763-64615814 processed_transcript
ENSG00000200714 (Y_RNA)
Y RNA 		ENST00000363844 (Y_RNA.1-379) 65592731-65592820 misc_RNA
ENSG00000213873 (RP11-678D18.1)
 ENST00000518241 (RP11-678D18.1-001) 65377592-65378111 processed_pseudogene
ENSG00000239261 (RPL31P41)
ribosomal protein L31 pseudogene 41 		ENST00000477967 (RPL31P41-001) 65155407-65155778 processed_pseudogene
ENSG00000254006 (RP11-1D12.2)
 ENST00000522106 (RP11-1D12.2-001) 64801236-64817573 lincRNA
ENST00000523769 (RP11-1D12.2-002) 64801358-64805700 lincRNA
ENSG00000254081 (LINC01299)
long intergenic non-protein coding RNA 1299 		ENST00000520902 (LINC01299-001) 65527008-65562780 lincRNA
ENSG00000254330 (RP11-1D12.1)
 ENST00000519680 (RP11-1D12.1-001) 64703774-64734459 sense_intronic
ENSG00000272010 (CTD-3025N20.3)
 ENST00000606963 (CTD-3025N20.3-001) 65591850-65592472 lincRNA
CIL_0003G9_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000039519-ENSMUSG00000027599 CGP 10090 3:18071950-19163065
GeneTranscriptPositionBiotype
ENSMUSG00000027599 (Armc1)
armadillo repeat containing 1 		ENSMUST00000029125 (Armc1-201) 19132146-19163065 protein_coding
ENSMUSG00000039519 (Cyp7b1)
cytochrome P450, family 7, subfamily b, polypeptide 1 		ENSMUST00000035625 (Cyp7b1-201) 18071950-18243338 protein_coding
ENSMUSG00000096391 (Gm23686)
predicted gene, 23686 		ENSMUST00000083241 (Gm23686-201) 18177462-18177625 snRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003G9_0001ENSG00000104442ENST00000276569ENST00000458464ENST00000518908ENST00000519352ENST00000523384ENST00000528721ENSG00000172817ENST00000310193ENST00000523954ENSG00000200714ENST00000363844ENSG00000213873ENST00000518241ENSG00000239261ENST00000477967ENSG00000254006ENST00000522106ENST00000523769ENSG00000254081ENST00000520902ENSG00000254330ENST00000519680ENSG00000272010ENST00000606963CIL_0003G9_0002ENSMUSG00000027599ENSMUST00000029125ENSMUSG00000039519ENSMUST00000035625ENSMUSG00000096391ENSMUST00000083241
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003G9_0001ENSG00000104442ENST00000276569ENST00000458464ENST00000518908ENST00000523384ENST00000528721ENSG00000172817ENST00000310193ENST00000523954ENSG00000200714ENST00000363844ENSG00000213873ENST00000518241ENSG00000239261ENST00000477967ENSG00000254006ENST00000522106ENST00000523769ENSG00000254081ENST00000520902ENSG00000254330ENST00000519680ENSG00000272010ENST00000606963CIL_0003G9_0002ENSMUSG00000027599ENSMUST00000029125ENSMUSG00000039519ENSMUST00000035625ENSMUSG00000096391ENSMUST00000083241
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000104442 ENST00000276569 5.510±0.00 7.395±0.00 1.661±0.00 8.578±2.03 6.737±0.00 4.626±2.28 3.892±2.65 5.181±3.24 4.290±0.37 2.712±0.27 6.196±0.00 4.859±2.10 3.991±0.40 4.309±3.65
ENST00000458464 N/A N/A N/A N/A N/A 1.444±0.00 N/A N/A N/A N/A 0.272±0.00 N/A N/A N/A
ENST00000518908 N/A N/A 1.333±0.00 N/A N/A N/A N/A N/A 3.785±0.00 N/A N/A N/A N/A N/A
ENST00000519352 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523384 N/A N/A N/A 10.326±0.00 N/A 5.432±0.00 4.048±0.00 4.440±0.00 N/A N/A N/A N/A N/A N/A
ENST00000528721 N/A N/A N/A N/A 2.442±0.00 N/A N/A 2.166±0.00 N/A 3.887±0.00 1.324±0.00 N/A N/A 1.401±0.00
ENSG00000172817 ENST00000310193 N/A N/A 1.084±0.00 1.006±0.00 0.549±0.00 0.897±0.17 0.331±0.00 1.297±0.00 0.681±0.05 2.517±0.00 0.244±0.00 0.266±0.14 0.163±0.04 0.919±0.42
ENST00000523954 N/A N/A N/A N/A N/A 1.144±0.55 N/A 1.391±0.00 1.739±0.00 N/A N/A 0.686±0.26 0.776±0.38 N/A
ENSG00000200714 ENST00000363844 N/A 1.533±0.00 N/A N/A 1.002±0.00 N/A 0.678±0.00 N/A 0.878±0.00 N/A N/A 3.002±0.00 6.293±0.00 5.700±0.00
ENSG00000213873 ENST00000518241 N/A N/A N/A 0.031±0.00 N/A 0.027±0.00 N/A 0.029±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000239261 ENST00000477967 N/A N/A N/A 0.038±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000254006 ENST00000522106 N/A N/A N/A 0.048±0.00 0.091±0.00 0.028±0.00 N/A N/A 0.067±0.00 N/A N/A N/A N/A 0.197±0.00
ENST00000523769 N/A 0.418±0.00 N/A N/A N/A N/A 0.038±0.00 0.042±0.00 N/A 0.150±0.00 N/A N/A N/A N/A
ENSG00000254081 ENST00000520902 0.049±0.00 0.135±0.00 N/A 0.218±0.04 0.072±0.00 0.004±0.00 0.045±0.00 0.004±0.00 N/A 0.030±0.02 N/A 0.014±0.00 N/A 0.052±0.01
ENSG00000254330 ENST00000519680 0.015±0.00 N/A N/A 0.032±0.00 0.031±0.00 N/A N/A 0.531±0.00 0.014±0.00 0.037±0.00 N/A 0.258±0.00 N/A 0.026±0.00
ENSG00000272010 ENST00000606963 0.661±0.00 0.733±0.00 N/A 1.453±0.84 1.450±0.82 0.271±0.00 0.245±0.00 0.886±0.03 0.711±0.00 0.269±0.00 1.170±0.00 1.224±0.81 0.328±0.22 1.179±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027599 ENSMUST00000029125 6.133±0.62 3.891±0.15 12.644±1.94 10.188±2.49 4.351±0.61 2.871±0.48 6.112±0.57 7.095±1.24 8.910±4.55 3.927±0.60 5.930±0.97 4.220±2.00 9.209±4.31 1.768±0.48
ENSMUSG00000039519 ENSMUST00000035625 0.949±0.86 5.191±1.95 2.698±0.52 1.380±0.88 2.672±2.55 0.478±0.40 0.322±0.05 1.694±0.77 8.585±9.24 1.716±1.45 0.075±0.05 5.075±4.30 0.251±0.21 0.116±0.05
ENSMUSG00000096391 ENSMUST00000083241 N/A N/A N/A 1.277±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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