C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: dynactin 6
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000104671 DCTN6 9606 + 8:30156297-30183640 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000221114 DCTN6-001 30156297-30183640 protein_coding
  ENST00000519830 DCTN6-006 30156375-30180501 nonsense_mediated_decay
  ENST00000520829 DCTN6-003 30156369-30181021 protein_coding
  ENST00000522141 DCTN6-005 30156319-30183461 nonsense_mediated_decay
  ENST00000522540 DCTN6-004 30156369-30177494 retained_intron
  ENST00000523666 DCTN6-007 30156370-30183553 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000221114ENST00000522141ENST00000522540ENST00000523666
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000221114 7.099±0.00 10.591±0.00 1.899±0.00 31.643±0.64 12.731±2.78 10.913±3.43 8.217±0.00 7.887±0.41 7.034±3.75 7.361±0.54 3.281±1.11 12.574±5.70 25.325±0.22 17.692±0.00
ENST00000522141 N/A 10.774±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.912±0.00 N/A 10.845±0.00
ENST00000522540 N/A N/A 6.117±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523666 N/A N/A N/A N/A N/A N/A N/A N/A 4.820±0.00 N/A 1.585±0.00 6.697±0.00 12.389±0.00 10.101±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008D0 CIL_0008D0_0001 VISTA 8:29977526-30581393
CIL_0008IH CIL_0008IH_0001 VISTA 8:30111104-30714589

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000776 IEA kinetochore
GO:0005813 IDA centrosome
GO:0005829 TAS cytosol
GO:0005869 IEA dynactin complex
GO:0007052 IEA mitotic spindle organization
GO:0019886 TAS antigen processing and presentation of exogenous peptide antigen via MHC class II
GO:0045502 IEA dynein binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000031516 Dctn6 dynactin 6 protein_coding Mus_musculus

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