C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: protein phosphatase 6, regulatory subunit 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000105063 PPP6R1 9606 - 19:55229780-55258995 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000412770 PPP6R1-001 55229780-55258995 protein_coding
  ENST00000586690 PPP6R1-006 55236313-55239505 retained_intron
  ENST00000587283 PPP6R1-002 55230490-55247372 protein_coding
  ENST00000587457 PPP6R1-008 55229780-55233194 retained_intron
  ENST00000589343 PPP6R1-005 55238694-55239688 retained_intron
  ENST00000591323 PPP6R1-004 55239986-55242368 retained_intron
  ENST00000591602 PPP6R1-003 55241477-55242618 retained_intron
  ENST00000592242 PPP6R1-007 55245344-55255769 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000412770ENST00000587283ENST00000587457
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000412770 23.465±0.00 52.936±0.00 1.980±0.00 13.452±9.28 10.833±7.63 10.597±8.51 7.235±6.33 12.488±10.50 5.575±4.42 15.185±13.47 10.473±9.81 21.149±13.06 27.681±1.78 89.438±2.50
ENST00000587283 N/A N/A N/A N/A N/A 0.809±0.00 N/A N/A 0.397±0.00 N/A N/A 0.845±0.00 N/A N/A
ENST00000587457 N/A N/A N/A N/A 1.687±0.00 N/A 0.238±0.00 N/A N/A N/A 1.099±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00068Y CIL_00068Y_0001 CGP 19:55226639-55258995
CIL_0004K3 CIL_0004K3_0001 CGP 19:55229780-55280381

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005488 IEA binding
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm
GO:0019903 IPI protein phosphatase binding
GO:0043666 IDA regulation of phosphoprotein phosphatase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000052296 Ppp6r1 protein phosphatase 6, regulatory subunit 1 protein_coding Mus_musculus

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