C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_00068Y_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000180089-ENSG00000105063 CGP 9606 19:55226639-55258995
GeneTranscriptPositionBiotype
ENSG00000105063 (PPP6R1)
protein phosphatase 6, regulatory subunit 1
ENST00000412770 (PPP6R1-001) 55229780-55258995 protein_coding
ENST00000586690 (PPP6R1-006) 55236313-55239505 retained_intron
ENST00000587283 (PPP6R1-002) 55230490-55247372 protein_coding
ENST00000587457 (PPP6R1-008) 55229780-55233194 retained_intron
ENST00000589343 (PPP6R1-005) 55238694-55239688 retained_intron
ENST00000591323 (PPP6R1-004) 55239986-55242368 retained_intron
ENST00000591602 (PPP6R1-003) 55241477-55242618 retained_intron
ENST00000592242 (PPP6R1-007) 55245344-55255769 protein_coding
ENSG00000275519 (MIR6804)
microRNA 6804
ENST00000614724 (MIR6804-201) 55230885-55230952 miRNA
ENSG00000278328 (MIR6802)
microRNA 6802
ENST00000617379 (MIR6802-201) 55239912-55239976 miRNA
CIL_00068Y_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000045282-ENSMUSG00000052296 CGP 10090 7:4628042-4658950
GeneTranscriptPositionBiotype
ENSMUSG00000045282 (Tmem86b)
transmembrane protein 86B
ENSMUST00000055085 (Tmem86b-201) 4628042-4630482 protein_coding
ENSMUSG00000052296 (Ppp6r1)
protein phosphatase 6, regulatory subunit 1
ENSMUST00000064099 (Ppp6r1-201) 4631501-4658950 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00068Y_0001ENSG00000105063ENST00000412770ENST00000586690ENST00000587283ENST00000587457ENST00000589343ENST00000591323ENST00000591602ENST00000592242ENSG00000275519ENST00000614724ENSG00000278328ENST00000617379CIL_00068Y_0002ENSMUSG00000045282ENSMUST00000055085ENSMUSG00000052296ENSMUST00000064099
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00068Y_0001ENSG00000105063ENST00000412770ENST00000587283ENST00000587457ENSG00000275519ENST00000614724ENSG00000278328ENST00000617379CIL_00068Y_0002ENSMUSG00000045282ENSMUST00000055085ENSMUSG00000052296ENSMUST00000064099
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000105063 ENST00000412770 23.465±0.00 52.936±0.00 1.980±0.00 13.452±9.28 10.833±7.63 10.597±8.51 7.235±6.33 12.488±10.50 5.575±4.42 15.185±13.47 10.473±9.81 21.149±13.06 27.681±1.78 89.438±2.50
ENST00000586690 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587283 N/A N/A N/A N/A N/A 0.809±0.00 N/A N/A 0.397±0.00 N/A N/A 0.845±0.00 N/A N/A
ENST00000587457 N/A N/A N/A N/A 1.687±0.00 N/A 0.238±0.00 N/A N/A N/A 1.099±0.00 N/A N/A N/A
ENST00000589343 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591323 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591602 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592242 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000275519 ENST00000614724 N/A 0.652±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000278328 ENST00000617379 N/A 1.568±0.00 N/A N/A N/A N/A N/A N/A N/A 3.412±0.00 N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000045282 ENSMUST00000055085 0.880±0.24 3.988±3.00 5.726±0.98 6.228±5.20 2.531±1.93 3.091±1.09 1.527±0.46 25.887±5.30 108.461±78.73 3.086±1.34 0.385±0.13 2.660±1.93 4.115±4.71 14.026±6.75
ENSMUSG00000052296 ENSMUST00000064099 38.527±7.90 45.740±5.01 32.416±0.78 31.329±11.70 42.822±12.65 55.119±5.17 24.187±3.18 42.589±4.58 30.898±5.16 45.055±3.07 17.976±1.81 39.792±9.66 25.190±11.35 44.380±23.66

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