C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: heterogeneous nuclear ribonucleoprotein U-like 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000105323 HNRNPUL1 9606 + 19:41262496-41307598 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000263367 HNRNPUL1-011 41265122-41307019 protein_coding
  ENST00000352456 HNRNPUL1-001 41262496-41307598 protein_coding
  ENST00000378215 HNRNPUL1-004 41264372-41307038 protein_coding
  ENST00000392006 HNRNPUL1-003 41264331-41307376 protein_coding
  ENST00000593587 HNRNPUL1-010 41265079-41306925 protein_coding
  ENST00000594207 HNRNPUL1-021 41265101-41281128 processed_transcript
  ENST00000595018 HNRNPUL1-002 41262519-41307019 protein_coding
  ENST00000595196 HNRNPUL1-009 41264411-41307050 nonsense_mediated_decay
  ENST00000595336 HNRNPUL1-022 41268078-41272206 protein_coding
  ENST00000595806 HNRNPUL1-006 41302393-41307038 retained_intron
  ENST00000597725 HNRNPUL1-020 41262530-41281214 protein_coding
  ENST00000599521 HNRNPUL1-014 41268299-41272370 retained_intron
  ENST00000599614 HNRNPUL1-007 41272118-41307087 protein_coding
  ENST00000599719 HNRNPUL1-008 41262662-41294581 protein_coding
  ENST00000600332 HNRNPUL1-016 41276270-41278443 nonsense_mediated_decay
  ENST00000600493 HNRNPUL1-015 41298490-41301646 processed_transcript
  ENST00000600596 HNRNPUL1-017 41274033-41294388 nonsense_mediated_decay
  ENST00000601309 HNRNPUL1-019 41262671-41276168 protein_coding
  ENST00000601336 HNRNPUL1-018 41264847-41276286 protein_coding
  ENST00000602130 HNRNPUL1-005 41264451-41307029 protein_coding
  ENST00000617305 HNRNPUL1-201 41264458-41307038 protein_coding
  ENST00000617774 HNRNPUL1-202 41264422-41305854 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000352456ENST00000392006ENST00000595018ENST00000595196ENST00000599614ENST00000602130
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000352456 67.180±0.00 69.847±0.00 N/A 27.443±0.00 42.026±0.00 45.829±0.00 1.578±0.00 N/A N/A N/A N/A 34.677±24.43 9.577±0.00 80.567±0.00
ENST00000392006 24.974±0.00 N/A 4.056±0.00 6.970±4.15 6.325±0.00 9.792±4.80 N/A 1.496±0.00 7.417±0.00 5.800±0.00 10.075±7.31 6.019±0.00 9.719±0.00 22.574±7.12
ENST00000595018 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.839±0.00 N/A N/A
ENST00000595196 N/A N/A N/A 0.977±0.00 N/A N/A N/A N/A 3.205±0.00 N/A N/A N/A N/A N/A
ENST00000599614 N/A N/A N/A N/A N/A 5.771±0.00 N/A N/A N/A 3.820±0.00 N/A 23.916±0.00 22.391±0.00 55.556±0.00
ENST00000602130 N/A N/A 2.846±0.00 14.294±0.00 15.492±0.00 6.479±0.00 1.549±0.00 2.375±0.00 N/A 32.512±0.00 26.185±0.00 N/A N/A 23.370±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008TR CIL_0008TR_0001 VISTA 19:41131081-41732986

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000398 TAS mRNA splicing, via spliceosome
GO:0003676 IEA nucleic acid binding
GO:0003723 TAS RNA binding
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0005654 TAS nucleoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006396 IEA RNA processing
GO:0008380 TAS RNA splicing
GO:0009615 IEA response to virus
GO:0010467 TAS gene expression
GO:0019013 IEA viral nucleocapsid
GO:0019899 IPI enzyme binding
GO:0030529 IEA ribonucleoprotein complex
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000040564 hnrnpul1 heterogeneous nuclear ribonucleoprotein U-like 1 protein_coding Danio_rerio
ENSDARG00000079780 FP085405.1 Uncharacterized protein protein_coding Danio_rerio
ENSMUSG00000040725 Hnrnpul1 heterogeneous nuclear ribonucleoprotein U-like 1 protein_coding Mus_musculus

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