C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: intercellular adhesion molecule 5, telencephalin
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000105376 ICAM5 9606 + 19:10289981-10296778 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000221980 ICAM5-001 10289981-10296778 protein_coding
  ENST00000586004 ICAM5-005 10290024-10291708 processed_transcript
  ENST00000586480 ICAM5-002 10291473-10296776 retained_intron
  ENST00000587398 ICAM5-004 10290977-10291747 protein_coding
  ENST00000588912 ICAM5-003 10289993-10290920 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000221980ENST00000586004ENST00000586480ENST00000587398ENST00000588912
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000221980 N/A N/A N/A 8.265±1.51 N/A N/A N/A N/A N/A 2.973±0.00 N/A N/A 0.839±0.00 1.487±0.00
ENST00000586004 0.198±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.834±0.00 N/A
ENST00000586480 N/A 0.360±0.00 0.049±0.00 3.448±0.00 0.218±0.00 0.102±0.04 0.114±0.00 0.276±0.00 0.139±0.01 4.095±3.20 0.058±0.00 0.906±0.59 0.529±0.32 1.718±0.00
ENST00000587398 N/A N/A 0.243±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588912 N/A N/A 0.147±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004GD CIL_0004GD_0001 CGP 19:10286967-10296778
CIL_0004GL CIL_0004GL_0001 CGP 19:10289981-10309880

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI:IEA protein binding
GO:0005886 TAS plasma membrane
GO:0005887 TAS integral component of plasma membrane
GO:0006909 IEA phagocytosis
GO:0016337 IEA single organismal cell-cell adhesion

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000032174 Icam5 intercellular adhesion molecule 5, telencephalin protein_coding Mus_musculus

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