C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0004GD_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000105371-ENSG00000105376 CGP 9606 19:10286967-10296778
GeneTranscriptPositionBiotype
ENSG00000105376 (ICAM5)
intercellular adhesion molecule 5, telencephalin
ENST00000221980 (ICAM5-001) 10289981-10296778 protein_coding
ENST00000586004 (ICAM5-005) 10290024-10291708 processed_transcript
ENST00000586480 (ICAM5-002) 10291473-10296776 retained_intron
ENST00000587398 (ICAM5-004) 10290977-10291747 protein_coding
ENST00000588912 (ICAM5-003) 10289993-10290920 retained_intron
ENSG00000267607 (CTD-2369P2.8)
ENST00000589379 (CTD-2369P2.8-001) 10285801-10289019 antisense
CIL_0004GD_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000001014-ENSMUSG00000032174 CGP 10090 9:21029373-21039036
GeneTranscriptPositionBiotype
ENSMUSG00000001014 (Icam4)
intercellular adhesion molecule 4, Landsteiner-Wiener blood group
ENSMUST00000001040 (Icam4-201) 21029373-21030531 protein_coding
ENSMUSG00000032174 (Icam5)
intercellular adhesion molecule 5, telencephalin
ENSMUST00000019616 (Icam5-201) 21032038-21039036 protein_coding
ENSMUSG00000097432 (Gm20603)
predicted gene 20603
ENSMUST00000181169 (Gm20603-201) 21028307-21032357 lincRNA
ENSMUSG00000097535 (Gm26592)
predicted gene, 26592
ENSMUST00000180870 (Gm26592-201) 21034290-21037782 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004GD_0001ENSG00000105376ENST00000221980ENST00000586004ENST00000586480ENST00000587398ENST00000588912ENSG00000267607ENST00000589379CIL_0004GD_0002ENSMUSG00000001014ENSMUST00000001040ENSMUSG00000032174ENSMUST00000019616ENSMUSG00000097432ENSMUST00000181169ENSMUSG00000097535ENSMUST00000180870
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004GD_0001ENSG00000105376ENST00000221980ENST00000586004ENST00000586480ENST00000587398ENST00000588912ENSG00000267607ENST00000589379CIL_0004GD_0002ENSMUSG00000001014ENSMUST00000001040ENSMUSG00000032174ENSMUST00000019616ENSMUSG00000097432ENSMUST00000181169ENSMUSG00000097535ENSMUST00000180870
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000105376 ENST00000221980 N/A N/A N/A 8.265±1.51 N/A N/A N/A N/A N/A 2.973±0.00 N/A N/A 0.839±0.00 1.487±0.00
ENST00000586004 0.198±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.834±0.00 N/A
ENST00000586480 N/A 0.360±0.00 0.049±0.00 3.448±0.00 0.218±0.00 0.102±0.04 0.114±0.00 0.276±0.00 0.139±0.01 4.095±3.20 0.058±0.00 0.906±0.59 0.529±0.32 1.718±0.00
ENST00000587398 N/A N/A 0.243±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588912 N/A N/A 0.147±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000267607 ENST00000589379 7.123±0.00 23.774±0.00 N/A 5.554±0.00 4.739±0.00 5.213±0.00 3.272±0.00 8.475±0.00 7.060±0.00 143.915±0.00 4.539±0.00 7.466±1.40 6.123±1.67 3.363±1.87
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000001014 ENSMUST00000001040 N/A N/A N/A N/A N/A N/A N/A N/A 43.678±22.54 N/A 1.285±0.34 N/A N/A N/A
ENSMUSG00000032174 ENSMUST00000019616 N/A N/A N/A 36.084±35.64 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.382±0.55
ENSMUSG00000097432 ENSMUST00000181169 1.357±0.42 N/A 1.660±0.10 N/A 2.375±0.79 N/A 0.640±0.11 1.409±0.14 1.334±0.98 N/A 0.217±0.09 1.134±0.04 1.453±0.23 N/A
ENSMUSG00000097535 ENSMUST00000180870 N/A N/A N/A 8.394±8.43 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.704±0.11

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