C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: Ets2 repressor factor
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000105722 ERF 9606 - 19:42247572-42255157 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000222329 ERF-001 42247572-42255157 protein_coding
  ENST00000440177 ERF-003 42248157-42254635 protein_coding
  ENST00000593944 ERF-006 42249593-42253899 protein_coding
  ENST00000595448 ERF-008 42249528-42250172 retained_intron
  ENST00000595941 ERF-005 42250444-42253894 processed_transcript
  ENST00000596818 ERF-004 42250130-42255107 retained_intron
  ENST00000598965 ERF-007 42249622-42250441 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000222329ENST00000440177
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000222329 11.626±0.00 17.635±0.00 0.416±0.00 31.894±0.00 13.062±0.00 14.803±0.00 8.850±0.00 10.343±0.00 7.942±0.00 31.125±0.00 13.512±11.58 7.522±0.00 28.242±0.00
ENST00000440177 N/A 8.026±0.00 1.188±0.00 N/A N/A N/A N/A 1.361±0.00 N/A 0.683±0.00 23.805±14.87 11.169±2.13 8.308±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000287 CIL_000287_0001 CGP 19:42247572-42295797

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000122 IDA negative regulation of transcription from RNA polymerase II promoter
GO:0000981 IBA sequence-specific DNA binding RNA polymerase II transcription factor activity
GO:0001701 IEA in utero embryonic development
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0003714 IDA transcription corepressor activity
GO:0005634 IBA nucleus
GO:0005654 TAS nucleoplasm
GO:0005829 TAS cytosol
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006366 IBA transcription from RNA polymerase II promoter
GO:0007049 NAS cell cycle
GO:0010668 IEA ectodermal cell differentiation
GO:0030154 IBA cell differentiation
GO:0043565 IEA sequence-specific DNA binding
GO:0060707 IEA trophoblast giant cell differentiation
GO:0060710 IEA chorio-allantoic fusion

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000086892 erfl1 Ets2 repressor factor like 1 protein_coding Danio_rerio
ENSMUSG00000040857 Erf Ets2 repressor factor protein_coding Mus_musculus

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