C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RUN domain containing 3B
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000105784 RUNDC3B 9606 + 7:87627548-87832296 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000312373 RUNDC3B-008 87700416-87832293 retained_intron
  ENST00000338056 RUNDC3B-001 87628413-87832296 protein_coding
  ENST00000394654 RUNDC3B-003 87628615-87830514 protein_coding
  ENST00000466676 RUNDC3B-006 87627548-87741537 processed_transcript
  ENST00000476114 RUNDC3B-009 87628450-87700572 retained_intron
  ENST00000489461 RUNDC3B-004 87629230-87741576 processed_transcript
  ENST00000493037 RUNDC3B-002 87628454-87830456 protein_coding
  ENST00000496000 RUNDC3B-007 87709250-87770657 processed_transcript
  ENST00000497788 RUNDC3B-005 87627672-87700550 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000312373ENST00000338056ENST00000394654ENST00000489461ENST00000493037ENST00000496000ENST00000497788
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000312373 0.376±0.00 0.321±0.00 N/A 1.757±0.45 0.926±0.00 0.228±0.05 N/A 0.473±0.00 0.561±0.00 0.051±0.00 0.186±0.00 0.121±0.07 0.028±0.01 0.908±0.00
ENST00000338056 N/A 0.299±0.00 N/A 0.672±0.00 N/A N/A N/A N/A 0.336±0.00 N/A N/A N/A 0.050±0.00 0.407±0.00
ENST00000394654 N/A N/A 0.765±0.00 3.245±0.00 N/A N/A 0.117±0.00 0.959±0.00 0.087±0.00 N/A N/A N/A N/A N/A
ENST00000489461 N/A N/A 0.492±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493037 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.042±0.00 N/A
ENST00000496000 N/A N/A N/A N/A N/A N/A N/A 2.422±0.00 N/A 0.967±0.00 N/A N/A 0.050±0.00 N/A
ENST00000497788 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.412±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00052G CIL_00052G_0002 CGP 7:87627548-87876357

Gene Ontology
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000009961 rundc3b RUN domain containing 3b protein_coding Danio_rerio
ENSMUSG00000040570 Rundc3b RUN domain containing 3B protein_coding Mus_musculus

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