C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00052G_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000009961-ENSDARG00000015856 CGP 7955 16:45917537-45981705
GeneTranscriptPositionBiotype
ENSDARG00000009961 (rundc3b)
RUN domain containing 3b 		ENSDART00000014140 (rundc3b-201) 45917537-45958497 protein_coding
ENSDARG00000015856 (slc25a40)
solute carrier family 25, member 40 		ENSDART00000021145 (slc25a40-201) 45968698-45981705 protein_coding
CIL_00052G_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000105784-ENSG00000075303 CGP 9606 7:87627548-87876357
GeneTranscriptPositionBiotype
ENSG00000075303 (SLC25A40)
solute carrier family 25, member 40 		ENST00000341119 (SLC25A40-001) 87833568-87876349 protein_coding
ENST00000429674 (SLC25A40-004) 87836168-87860598 nonsense_mediated_decay
ENST00000444363 (SLC25A40-003) 87854257-87876357 nonsense_mediated_decay
ENST00000446236 (SLC25A40-008) 87836110-87843864 nonsense_mediated_decay
ENST00000470328 (SLC25A40-006) 87836249-87842267 retained_intron
ENST00000483810 (SLC25A40-007) 87836297-87837147 retained_intron
ENST00000491499 (SLC25A40-005) 87856291-87876305 retained_intron
ENST00000496348 (SLC25A40-009) 87836111-87841741 retained_intron
ENSG00000085563 (ABCB1)
ATP-binding cassette, sub-family B (MDR/TAP), member 1 		ENST00000265724 (ABCB1-001) 87503859-87713248 protein_coding
ENST00000416177 (ABCB1-003) 87585654-87713294 protein_coding
ENST00000475929 (ABCB1-009) 87505902-87518963 processed_transcript
ENST00000476862 (ABCB1-004) 87600813-87713295 processed_transcript
ENST00000482527 (ABCB1-005) 87545949-87550158 retained_intron
ENST00000483831 (ABCB1-008) 87516509-87521119 retained_intron
ENST00000488737 (ABCB1-007) 87503864-87531697 processed_transcript
ENST00000491360 (ABCB1-010) 87504156-87506141 retained_intron
ENST00000496821 (ABCB1-006) 87515228-87537062 processed_transcript
ENST00000543898 (ABCB1-201) 87503863-87713323 protein_coding
ENST00000622132 (ABCB1-202) 87503633-87601073 protein_coding
ENSG00000105784 (RUNDC3B)
RUN domain containing 3B 		ENST00000312373 (RUNDC3B-008) 87700416-87832293 retained_intron
ENST00000338056 (RUNDC3B-001) 87628413-87832296 protein_coding
ENST00000394654 (RUNDC3B-003) 87628615-87830514 protein_coding
ENST00000466676 (RUNDC3B-006) 87627548-87741537 processed_transcript
ENST00000476114 (RUNDC3B-009) 87628450-87700572 retained_intron
ENST00000489461 (RUNDC3B-004) 87629230-87741576 processed_transcript
ENST00000493037 (RUNDC3B-002) 87628454-87830456 protein_coding
ENST00000496000 (RUNDC3B-007) 87709250-87770657 processed_transcript
ENST00000497788 (RUNDC3B-005) 87627672-87700550 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00052G_0001ENSDARG00000009961ENSDART00000014140ENSDARG00000015856ENSDART00000021145CIL_00052G_0002ENSG00000075303ENST00000341119ENST00000429674ENST00000444363ENST00000446236ENST00000470328ENST00000483810ENST00000491499ENST00000496348ENSG00000085563ENST00000265724ENST00000416177ENST00000475929ENST00000476862ENST00000482527ENST00000483831ENST00000488737ENST00000491360ENST00000496821ENST00000543898ENST00000622132ENSG00000105784ENST00000312373ENST00000338056ENST00000394654ENST00000466676ENST00000476114ENST00000489461ENST00000493037ENST00000496000ENST00000497788
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00052G_0001ENSDARG00000009961ENSDART00000014140ENSDARG00000015856ENSDART00000021145CIL_00052G_0002ENSG00000075303ENST00000341119ENST00000429674ENST00000491499ENST00000496348ENSG00000085563ENST00000265724ENST00000475929ENST00000482527ENST00000488737ENST00000496821ENST00000543898ENST00000622132ENSG00000105784ENST00000312373ENST00000338056ENST00000394654ENST00000489461ENST00000493037ENST00000496000ENST00000497788
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000009961 ENSDART00000014140 N/A N/A N/A 0.380±0.15 N/A N/A 0.276±0.25 0.258±0.00 0.040±0.00 N/A 0.031±0.00 N/A N/A N/A
ENSDARG00000015856 ENSDART00000021145 N/A N/A N/A 5.142±2.80 N/A N/A 4.706±2.04 2.221±1.79 0.971±0.00 N/A 1.700±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000075303 ENST00000341119 1.246±0.00 1.926±0.00 N/A 3.100±2.29 1.626±0.00 1.086±0.06 1.246±0.33 2.515±1.65 0.732±0.20 1.371±0.00 0.514±0.00 2.296±0.86 0.770±0.17 2.419±0.00
ENST00000429674 N/A N/A 2.907±0.00 2.784±0.00 N/A 2.923±0.00 N/A N/A N/A 2.520±0.00 0.713±0.00 N/A N/A N/A
ENST00000444363 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000446236 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000470328 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000483810 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491499 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.711±0.00 N/A N/A N/A
ENST00000496348 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.234±0.00 N/A N/A N/A
ENSG00000085563 ENST00000265724 0.694±0.00 N/A 7.962±0.00 2.404±0.16 2.014±1.60 1.992±1.61 0.383±0.00 5.202±1.33 1.350±0.28 1.043±0.36 N/A 0.786±0.34 1.305±0.18 0.690±0.00
ENST00000416177 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000475929 0.938±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 1.543±0.00 1.138±0.00 N/A N/A N/A
ENST00000476862 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000482527 N/A N/A N/A N/A N/A N/A 0.693±0.00 N/A N/A N/A 0.249±0.00 N/A N/A N/A
ENST00000483831 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000488737 N/A N/A N/A N/A N/A N/A N/A N/A 2.463±0.00 N/A N/A N/A 1.071±0.21 0.755±0.00
ENST00000491360 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496821 N/A N/A N/A N/A 4.942±0.00 N/A N/A 5.277±0.00 N/A N/A N/A N/A N/A N/A
ENST00000543898 N/A N/A N/A N/A N/A 0.622±0.00 N/A N/A N/A N/A N/A 0.104±0.00 2.163±0.00 N/A
ENST00000622132 N/A 0.620±0.00 N/A 0.510±0.00 N/A N/A N/A N/A 1.961±0.00 N/A N/A N/A 1.012±0.00 0.881±0.00
ENSG00000105784 ENST00000312373 0.376±0.00 0.321±0.00 N/A 1.757±0.45 0.926±0.00 0.228±0.05 N/A 0.473±0.00 0.561±0.00 0.051±0.00 0.186±0.00 0.121±0.07 0.028±0.01 0.908±0.00
ENST00000338056 N/A 0.299±0.00 N/A 0.672±0.00 N/A N/A N/A N/A 0.336±0.00 N/A N/A N/A 0.050±0.00 0.407±0.00
ENST00000394654 N/A N/A 0.765±0.00 3.245±0.00 N/A N/A 0.117±0.00 0.959±0.00 0.087±0.00 N/A N/A N/A N/A N/A
ENST00000466676 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000476114 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000489461 N/A N/A 0.492±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493037 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.042±0.00 N/A
ENST00000496000 N/A N/A N/A N/A N/A N/A N/A 2.422±0.00 N/A 0.967±0.00 N/A N/A 0.050±0.00 N/A
ENST00000497788 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.412±0.00 N/A N/A N/A

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