C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: extracellular matrix protein 2, female organ and adipocyte specific
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000106823 ECM2 9606 - 9:92493554-92536655 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000344604 ECM2-001 92495312-92536055 protein_coding
  ENST00000375540 ECM2-002 92516712-92536055 protein_coding
  ENST00000395534 ECM2-003 92517688-92536655 protein_coding
  ENST00000444490 ECM2-201 92493554-92536092 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000344604ENST00000375540ENST00000395534ENST00000444490
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000344604 4.055±0.00 1.612±0.00 N/A 0.394±0.00 17.409±14.88 1.170±0.00 1.668±0.42 3.638±3.38 N/A 5.757±0.00 0.653±0.00 9.248±9.44 N/A 2.712±2.18
ENST00000375540 N/A N/A 0.979±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.222±0.00 N/A
ENST00000395534 N/A N/A 2.923±0.00 N/A 9.145±0.00 N/A 2.741±0.00 N/A 6.579±0.00 N/A 0.661±0.00 12.715±0.00 N/A N/A
ENST00000444490 N/A N/A N/A 0.264±0.00 1.682±0.00 N/A 0.371±0.00 N/A N/A N/A 0.567±0.00 2.955±0.00 0.120±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00019H CIL_00019H_0002 CGP 9:92297358-92620533
CIL_000079 CIL_000079_0002 CGP 9:92325484-92620533
CIL_0007HF CIL_0007HF_0002 CGP 9:92456205-92536655
CIL_0007HG CIL_0007HG_0002 CGP 9:92493554-92670265

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005178 TAS integrin binding
GO:0005515 IEA protein binding
GO:0005518 IEA collagen binding
GO:0005578 TAS proteinaceous extracellular matrix
GO:0005614 IEA interstitial matrix
GO:0007160 TAS cell-matrix adhesion
GO:0008201 IEA heparin binding
GO:0010811 IEA positive regulation of cell-substrate adhesion
GO:0030198 IEA extracellular matrix organization
GO:0031012 IEA extracellular matrix
GO:0070052 IEA collagen V binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000071549 ecm2 extracellular matrix protein 2, female organ and adipocyte specific protein_coding Danio_rerio
ENSMUSG00000043631 Ecm2 extracellular matrix protein 2, female organ and adipocyte specific protein_coding Mus_musculus

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