C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: extracellular matrix protein 2, female organ and adipocyte specific
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000344604 ECM2-001 ENSG00000106823 9606 - 9:92495312-92536055 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLungMuscleOvaryTestisENST00000344604
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Lung Muscle Ovary Testis
ENST00000344604 4.055±0.00 1.612±0.00 0.394±0.00 17.409±14.88 1.170±0.00 1.668±0.42 3.638±3.38 5.757±0.00 0.653±0.00 9.248±9.44 2.712±2.18

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00019H CIL_00019H_0002 CGP 9:92297358-92620533
CIL_000079 CIL_000079_0002 CGP 9:92325484-92620533
CIL_0007HF CIL_0007HF_0002 CGP 9:92456205-92536655
CIL_0007HG CIL_0007HG_0002 CGP 9:92493554-92670265

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005178 TAS integrin binding
GO:0005515 IEA protein binding
GO:0005518 IEA collagen binding
GO:0005578 TAS proteinaceous extracellular matrix
GO:0005614 IEA interstitial matrix
GO:0007160 TAS cell-matrix adhesion
GO:0008201 IEA heparin binding
GO:0010811 IEA positive regulation of cell-substrate adhesion
GO:0030198 IEA extracellular matrix organization
GO:0031012 IEA extracellular matrix
GO:0070052 IEA collagen V binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000051504 Ecm2-201 protein_coding Mus_musculus 0 1295

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