C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: AT-hook transcription factor
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000106948 AKNA 9606 - 9:114334156-114394405 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000223791 AKNA-002 114336165-114376964 protein_coding
  ENST00000307564 AKNA-201 114334156-114394405 protein_coding
  ENST00000312033 AKNA-003 114359087-114388081 protein_coding
  ENST00000374075 AKNA-007 114336165-114377635 protein_coding
  ENST00000374079 AKNA-202 114336128-114348999 protein_coding
  ENST00000374088 AKNA-001 114336127-114387963 protein_coding
  ENST00000490767 AKNA-005 114356126-114358337 processed_transcript
  ENST00000491133 AKNA-006 114347773-114348999 processed_transcript
  ENST00000492875 AKNA-004 114336131-114346774 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000223791ENST00000307564ENST00000312033ENST00000374075ENST00000374079ENST00000374088ENST00000490767ENST00000492875
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000223791 2.776±0.00 8.047±0.00 N/A 0.457±0.00 2.023±0.00 1.307±0.00 0.814±0.00 N/A N/A 3.363±0.00 0.298±0.00 3.818±2.30 1.048±0.19 1.689±0.68
ENST00000307564 1.159±0.00 4.526±0.00 N/A 0.124±0.00 N/A 0.789±0.00 N/A 0.338±0.01 0.372±0.00 1.434±0.81 N/A 1.693±0.00 0.525±0.00 1.509±0.91
ENST00000312033 N/A N/A 0.301±0.00 N/A 1.553±0.00 N/A N/A 0.169±0.00 0.589±0.00 2.699±0.00 N/A 0.656±0.00 N/A N/A
ENST00000374075 N/A N/A N/A 0.160±0.00 N/A N/A N/A N/A N/A N/A 0.268±0.00 N/A N/A N/A
ENST00000374079 N/A 24.058±0.00 N/A N/A 3.030±0.00 4.718±0.00 N/A 1.632±0.00 N/A 5.675±0.00 0.468±0.00 5.574±2.58 2.992±0.41 N/A
ENST00000374088 8.383±0.00 15.020±0.00 0.396±0.00 0.946±0.00 1.902±0.62 3.034±0.00 0.756±0.00 0.938±0.78 N/A 3.954±2.02 N/A 10.802±5.78 3.168±0.76 2.249±0.00
ENST00000490767 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.916±0.00 N/A N/A N/A
ENST00000492875 N/A 4.992±0.00 0.208±0.00 0.366±0.00 0.798±0.00 1.534±0.00 0.274±0.00 0.551±0.00 0.876±0.00 1.545±0.35 0.305±0.00 0.525±0.00 N/A 0.895±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004P6 CIL_0004P6_0001 CGP 9:114329869-114394405
CIL_0002C9 CIL_0002C9_0002 CGP 9:114334156-114505450

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000978 IDA RNA polymerase II core promoter proximal region sequence-specific DNA binding
GO:0001077 IDA RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0016020 IDA membrane
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000087110 AKNA AT-hook transcription factor protein_coding Danio_rerio
ENSMUSG00000039158 Akna AT-hook transcription factor protein_coding Mus_musculus

Loading