C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002C9_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000087110-ENSDARG00000075362 CGP 7955 21:12125969-12376883
GeneTranscriptPositionBiotype
ENSDARG00000075362 (dfnb31a)
deafness, autosomal recessive 31a 		ENSDART00000111659 (dfnb31a-201) 12181898-12376504 protein_coding
ENSDART00000145366 (dfnb31a-001) 12185362-12376883 protein_coding
ENSDARG00000087110 (AKNA)
AT-hook transcription factor 		ENSDART00000127705 (AKNA-201) 12126121-12167259 protein_coding
ENSDART00000143874 (AKNA-001) 12125969-12174842 protein_coding
CIL_0002C9_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000106948-ENSG00000095397 CGP 9606 9:114334156-114505450
GeneTranscriptPositionBiotype
ENSG00000095397 (DFNB31)
deafness, autosomal recessive 31 		ENST00000265134 (DFNB31-001) 114402080-114503173 protein_coding
ENST00000362057 (DFNB31-004) 114402081-114504970 protein_coding
ENST00000374057 (DFNB31-005) 114478321-114505450 protein_coding
ENST00000374059 (DFNB31-002) 114402081-114426071 protein_coding
ENST00000480518 (DFNB31-003) 114503551-114504339 processed_transcript
ENSG00000106948 (AKNA)
AT-hook transcription factor 		ENST00000223791 (AKNA-002) 114336165-114376964 protein_coding
ENST00000307564 (AKNA-201) 114334156-114394405 protein_coding
ENST00000312033 (AKNA-003) 114359087-114388081 protein_coding
ENST00000374075 (AKNA-007) 114336165-114377635 protein_coding
ENST00000374079 (AKNA-202) 114336128-114348999 protein_coding
ENST00000374088 (AKNA-001) 114336127-114387963 protein_coding
ENST00000490767 (AKNA-005) 114356126-114358337 processed_transcript
ENST00000491133 (AKNA-006) 114347773-114348999 processed_transcript
ENST00000492875 (AKNA-004) 114336131-114346774 processed_transcript
ENSG00000235119 (RP11-9M16.2)
 ENST00000448674 (RP11-9M16.2-001) 114396724-114398503 lincRNA
ENSG00000271214 (RP11-9M16.3)
 ENST00000603019 (RP11-9M16.3-001) 114491564-114491741 processed_pseudogene
CIL_0002C9_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000039158-ENSMUSG00000039137 CGP 10090 4:63367125-63495991
GeneTranscriptPositionBiotype
ENSMUSG00000039137 (Whrn)
whirlin 		ENSMUST00000063650 (Whrn-001) 63414910-63495951 protein_coding
ENSMUST00000063672 (Whrn-017) 63431433-63495991 protein_coding
ENSMUST00000084510 (Whrn-005) 63414910-63495951 protein_coding
ENSMUST00000095037 (Whrn-008) 63414910-63495951 protein_coding
ENSMUST00000095038 (Whrn-006) 63414910-63495951 protein_coding
ENSMUST00000102867 (Whrn-002) 63414910-63495951 protein_coding
ENSMUST00000107393 (Whrn-004) 63414910-63495951 protein_coding
ENSMUST00000119294 (Whrn-007) 63414910-63495951 protein_coding
ENSMUST00000124016 (Whrn-011) 63414910-63493600 processed_transcript
ENSMUST00000133425 (Whrn-014) 63460163-63494759 protein_coding
ENSMUST00000140720 (Whrn-015) 63460820-63494677 retained_intron
ENSMUST00000144965 (Whrn-016) 63436229-63472740 protein_coding
ENSMUST00000145133 (Whrn-010) 63414910-63433322 retained_intron
ENSMUST00000145630 (Whrn-012) 63419469-63431929 nonsense_mediated_decay
ENSMUST00000148957 (Whrn-003) 63425712-63432002 processed_transcript
ENSMUST00000153307 (Whrn-013) 63434801-63461302 retained_intron
ENSMUST00000155058 (Whrn-009) 63414910-63433322 retained_intron
ENSMUSG00000039158 (Akna)
AT-hook transcription factor 		ENSMUST00000035724 (Akna-001) 63367125-63403354 protein_coding
ENSMUST00000140586 (Akna-002) 63379924-63381203 processed_transcript
ENSMUSG00000086953 (Aknaos)
AT-hook transcription factor, opposite strand 		ENSMUST00000144095 (Aknaos-001) 63381358-63394018 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002C9_0001ENSDARG00000075362ENSDART00000111659ENSDART00000145366ENSDARG00000087110ENSDART00000127705ENSDART00000143874CIL_0002C9_0002ENSG00000095397ENST00000265134ENST00000362057ENST00000374057ENST00000374059ENST00000480518ENSG00000106948ENST00000223791ENST00000307564ENST00000312033ENST00000374075ENST00000374079ENST00000374088ENST00000490767ENST00000491133ENST00000492875ENSG00000235119ENST00000448674ENSG00000271214ENST00000603019CIL_0002C9_0003ENSMUSG00000039137ENSMUST00000063650ENSMUST00000063672ENSMUST00000084510ENSMUST00000095037ENSMUST00000095038ENSMUST00000102867ENSMUST00000107393ENSMUST00000119294ENSMUST00000124016ENSMUST00000133425ENSMUST00000140720ENSMUST00000144965ENSMUST00000145133ENSMUST00000145630ENSMUST00000148957ENSMUST00000153307ENSMUST00000155058ENSMUSG00000039158ENSMUST00000035724ENSMUST00000140586ENSMUSG00000086953ENSMUST00000144095
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002C9_0001ENSDARG00000075362ENSDART00000111659ENSDART00000145366ENSDARG00000087110ENSDART00000127705ENSDART00000143874CIL_0002C9_0002ENSG00000095397ENST00000265134ENST00000362057ENST00000374057ENST00000374059ENSG00000106948ENST00000223791ENST00000307564ENST00000312033ENST00000374075ENST00000374079ENST00000374088ENST00000490767ENST00000492875ENSG00000235119ENST00000448674ENSG00000271214ENST00000603019CIL_0002C9_0003ENSMUSG00000039137ENSMUST00000063650ENSMUST00000063672ENSMUST00000084510ENSMUST00000095037ENSMUST00000095038ENSMUST00000102867ENSMUST00000107393ENSMUST00000119294ENSMUST00000124016ENSMUST00000133425ENSMUST00000148957ENSMUST00000153307ENSMUST00000155058ENSMUSG00000039158ENSMUST00000035724ENSMUSG00000086953ENSMUST00000144095
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000075362 ENSDART00000111659 N/A N/A N/A 1.831±0.57 N/A N/A 0.037±0.02 0.023±0.02 N/A N/A 0.250±0.00 N/A N/A N/A
ENSDART00000145366 N/A N/A N/A 1.166±0.00 N/A N/A 0.057±0.05 0.080±0.00 0.030±0.00 N/A 0.057±0.00 N/A N/A N/A
ENSDARG00000087110 ENSDART00000127705 N/A N/A N/A 0.373±0.09 N/A N/A 0.154±0.00 0.237±0.00 N/A N/A N/A N/A N/A N/A
ENSDART00000143874 N/A N/A N/A 0.614±0.50 N/A N/A 0.229±0.00 0.299±0.00 N/A N/A 0.090±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000095397 ENST00000265134 N/A 1.447±0.00 N/A 1.673±1.37 0.374±0.30 1.452±0.93 0.270±0.00 0.653±0.00 0.156±0.00 0.159±0.00 N/A 1.616±0.97 0.497±0.02 6.715±0.00
ENST00000362057 0.796±0.00 1.024±0.00 N/A 5.592±0.00 0.592±0.00 0.842±0.00 0.015±0.00 1.158±0.00 0.182±0.01 1.839±1.59 N/A 5.574±2.14 0.689±0.48 20.463±10.26
ENST00000374057 N/A N/A N/A 0.560±0.00 N/A N/A 0.079±0.00 N/A N/A N/A N/A 0.861±0.00 N/A N/A
ENST00000374059 0.079±0.00 0.634±0.00 N/A 0.404±0.00 0.240±0.10 N/A N/A N/A 0.044±0.00 1.724±0.00 N/A 1.329±1.12 N/A N/A
ENST00000480518 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000106948 ENST00000223791 2.776±0.00 8.047±0.00 N/A 0.457±0.00 2.023±0.00 1.307±0.00 0.814±0.00 N/A N/A 3.363±0.00 0.298±0.00 3.818±2.30 1.048±0.19 1.689±0.68
ENST00000307564 1.159±0.00 4.526±0.00 N/A 0.124±0.00 N/A 0.789±0.00 N/A 0.338±0.01 0.372±0.00 1.434±0.81 N/A 1.693±0.00 0.525±0.00 1.509±0.91
ENST00000312033 N/A N/A 0.301±0.00 N/A 1.553±0.00 N/A N/A 0.169±0.00 0.589±0.00 2.699±0.00 N/A 0.656±0.00 N/A N/A
ENST00000374075 N/A N/A N/A 0.160±0.00 N/A N/A N/A N/A N/A N/A 0.268±0.00 N/A N/A N/A
ENST00000374079 N/A 24.058±0.00 N/A N/A 3.030±0.00 4.718±0.00 N/A 1.632±0.00 N/A 5.675±0.00 0.468±0.00 5.574±2.58 2.992±0.41 N/A
ENST00000374088 8.383±0.00 15.020±0.00 0.396±0.00 0.946±0.00 1.902±0.62 3.034±0.00 0.756±0.00 0.938±0.78 N/A 3.954±2.02 N/A 10.802±5.78 3.168±0.76 2.249±0.00
ENST00000490767 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.916±0.00 N/A N/A N/A
ENST00000491133 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000492875 N/A 4.992±0.00 0.208±0.00 0.366±0.00 0.798±0.00 1.534±0.00 0.274±0.00 0.551±0.00 0.876±0.00 1.545±0.35 0.305±0.00 0.525±0.00 N/A 0.895±0.00
ENSG00000235119 ENST00000448674 0.296±0.00 0.637±0.00 N/A N/A N/A 0.152±0.00 N/A N/A N/A 0.656±0.00 N/A 12.024±0.00 0.233±0.00 0.290±0.00
ENSG00000271214 ENST00000603019 0.138±0.00 N/A N/A 0.499±0.00 N/A N/A N/A N/A N/A N/A N/A 0.885±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000039137 ENSMUST00000063650 0.788±0.10 5.825±1.70 0.432±0.13 1.667±0.00 N/A 0.904±0.00 N/A 1.482±0.48 0.240±0.05 0.477±0.24 0.220±0.10 3.261±0.65 0.134±0.06 2.080±0.53
ENSMUST00000063672 0.860±0.00 4.758±1.23 N/A N/A 1.224±0.00 1.891±0.00 N/A N/A 0.164±0.05 0.422±0.00 0.236±0.00 2.854±0.25 0.165±0.00 N/A
ENSMUST00000084510 0.547±0.00 N/A N/A 2.084±0.00 N/A 1.070±0.00 2.194±0.23 N/A 0.165±0.00 N/A N/A N/A N/A 1.756±0.52
ENSMUST00000095037 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.199±0.00 N/A 0.351±0.00 0.503±0.00
ENSMUST00000095038 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.177±0.00 N/A N/A N/A
ENSMUST00000102867 0.509±0.35 N/A 0.246±0.00 2.948±0.67 0.544±0.00 1.083±0.00 N/A 1.497±0.42 0.176±0.08 N/A 0.256±0.06 1.819±0.40 0.251±0.24 2.657±0.94
ENSMUST00000107393 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.346±0.00 N/A N/A N/A
ENSMUST00000119294 N/A 4.789±0.00 N/A N/A N/A N/A N/A 2.795±0.00 0.081±0.04 N/A N/A 3.396±0.36 N/A N/A
ENSMUST00000124016 1.091±0.00 N/A 0.500±0.00 9.823±0.00 0.238±0.00 N/A 3.959±0.25 1.834±0.71 0.160±0.00 0.564±0.00 0.246±0.10 5.530±0.66 0.318±0.13 N/A
ENSMUST00000133425 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.403±0.00
ENSMUST00000140720 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144965 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000145133 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000145630 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148957 N/A N/A N/A N/A 0.752±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153307 N/A N/A N/A N/A 0.357±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155058 1.978±0.43 8.938±1.66 0.692±0.00 3.114±0.57 0.748±0.35 2.931±0.62 N/A 1.327±0.00 0.145±0.08 0.510±0.00 0.082±0.00 3.992±0.68 0.125±0.02 N/A
ENSMUSG00000039158 ENSMUST00000035724 1.864±0.11 2.178±0.24 0.773±0.19 2.829±0.19 13.488±7.83 2.365±0.89 1.046±0.41 1.255±0.59 0.897±0.66 8.447±0.89 0.619±0.61 2.427±0.43 0.912±0.55 7.626±1.59
ENSMUST00000140586 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000086953 ENSMUST00000144095 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 14.705±1.84

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