C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: Ras association (RalGDS/AF-6) domain family member 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000107551 RASSF4 9606 + 10:44959407-44995891 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000340258 RASSF4-001 44959792-44995891 protein_coding
  ENST00000427758 RASSF4-008 44959831-44984113 protein_coding
  ENST00000428466 RASSF4-006 44970224-44983084 protein_coding
  ENST00000462822 RASSF4-007 44970169-44983912 processed_transcript
  ENST00000465735 RASSF4-003 44981039-44991960 retained_intron
  ENST00000471808 RASSF4-009 44984876-44991055 processed_transcript
  ENST00000471941 RASSF4-004 44983028-44991960 retained_intron
  ENST00000472561 RASSF4-012 44971794-44993430 processed_transcript
  ENST00000483709 RASSF4-005 44959839-44989374 nonsense_mediated_decay
  ENST00000484477 RASSF4-010 44989333-44991343 protein_coding
  ENST00000489171 RASSF4-002 44959407-44994707 retained_intron
  ENST00000493490 RASSF4-011 44990538-44991970 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENST00000340258ENST00000472561ENST00000489171
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENST00000340258 9.993±0.00 0.894±0.00 5.482±4.07 N/A 0.597±0.00 0.906±0.00 N/A N/A 0.868±0.00 3.271±0.00 9.928±0.00 N/A
ENST00000472561 N/A N/A N/A N/A N/A N/A N/A N/A N/A 15.861±0.00 N/A 6.580±0.00
ENST00000489171 N/A 2.557±0.00 4.771±3.35 1.554±0.00 0.967±0.00 0.767±0.00 8.468±7.22 1.031±0.00 N/A 4.900±2.22 N/A 2.926±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000R2 CIL_0000R2_0001 CGP 10:44959407-44995891

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0007049 IEA cell cycle
GO:0007165 IEA signal transduction

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000012460 rassf4 Ras association (RalGDS/AF-6) domain family member 4 protein_coding Danio_rerio
ENSMUSG00000042129 Rassf4 Ras association (RalGDS/AF-6) domain family member 4 protein_coding Mus_musculus

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